RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 KLHL40Q2TBA0 621 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 MFSD14CQ5VZR4 134 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 OLFML2BQ68BL8 750 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 HAUS3Q68CZ6 603 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 TRMT44Q8IYL2 757 aaKnown RBP18.55■□□□□ 0.56
ERCC4-208ENST00000576348 IGSF22Q8N9C0 903 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 PANK2Q9BZ23 570 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 GOLPH3LQ9H4A5 285 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 SAMM50Q9Y512 469 aa18.55■□□□□ 0.56
ERCC4-208ENST00000576348 PP2D1A8MPX8 630 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 GNRH1P01148 92 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 CCT6AP40227 531 aaKnown RBP18.54■□□□□ 0.56
ERCC4-208ENST00000576348 FLT3LGP49771 235 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 PRKCZQ05513 592 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 ITGB3BPQ13352 177 aaPredicted RBP18.54■□□□□ 0.56
ERCC4-208ENST00000576348 NEDD9Q14511 834 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 MIER3Q7Z3K6 550 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 PDILTQ8N807 584 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 ABHD16BQ9H3Z7 469 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 JPH1Q9HDC5 661 aaPredicted RBP18.54■□□□□ 0.56
ERCC4-208ENST00000576348 DDX19AQ9NUU7 478 aaKnown RBP18.54■□□□□ 0.56
ERCC4-208ENST00000576348 DACT1Q9NYF0 836 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 TSKSQ9UJT2 592 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 VAV3Q9UKW4 847 aa18.54■□□□□ 0.56
ERCC4-208ENST00000576348 NFASCO94856 1347 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 KDM3AQ9Y4C1 1321 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 SORBS3O60504 671 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 ATP9AO75110 1047 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 TXNP10599 105 aaKnown RBP18.53■□□□□ 0.56
ERCC4-208ENST00000576348 XRCC5P13010 732 aaKnown RBP18.53■□□□□ 0.56
ERCC4-208ENST00000576348 KCNA2P16389 499 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 UBA1P22314 1058 aaKnown RBP18.53■□□□□ 0.56
ERCC4-208ENST00000576348 CDC25AP30304 524 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 JAK3P52333 1124 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 SP4Q02446 784 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 SEMA3FQ13275 785 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 PPP2R5CQ13362 524 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 ACVR2BQ13705 512 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 USP49Q70CQ1 688 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 OTOP1Q7RTM1 612 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 ZNF296Q8WUU4 475 aaPredicted RBP18.53■□□□□ 0.56
ERCC4-208ENST00000576348 CCSER1Q9C0I3 900 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 UNC45AQ9H3U1 944 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 MLXIPQ9HAP2 919 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 SRRDQ9UH36 339 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 GABRQQ9UN88 632 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 MYH7BA7E2Y1 1941 aa18.53■□□□□ 0.56
ERCC4-208ENST00000576348 PLXNB2O15031 1838 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 ZNF236Q9UL36 1845 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 WDR64B1ANS9 1081 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 POLR2DO15514 142 aaKnown RBP18.52■□□□□ 0.56
ERCC4-208ENST00000576348 SLC26A4O43511 780 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 NR1I2O75469 434 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 SNAI1O95863 264 aaPredicted RBP18.52■□□□□ 0.56
ERCC4-208ENST00000576348 SFNP31947 248 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 STAT6P42226 847 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 KARSQ15046 597 aaKnown RBP18.52■□□□□ 0.56
ERCC4-208ENST00000576348 CCL14Q16627 93 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 RRAGBQ5VZM2 374 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
ERCC4-208ENST00000576348 CAVIN1Q6NZI2 390 aaKnown RBP18.52■□□□□ 0.56
ERCC4-208ENST00000576348 CEP57L1Q8IYX8 460 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 IQUBQ8NA54 791 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 RAET1EQ8TD07 263 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 DHX58Q96C10 678 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 SENP7Q9BQF6 1050 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 WBP1LQ9NX94 342 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 SLC9A2Q9UBY0 812 aa18.52■□□□□ 0.56
ERCC4-208ENST00000576348 FAM237AA0A1B0GTK4 181 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 DHX15O43143 795 aaKnown RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 ZNF202O95125 648 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 GGPS1O95749 300 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 CYP2C19P33261 490 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 EPHA7Q15375 998 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 LY6KQ17RY6 165 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 CYFIP1Q7L576 1253 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 DHX37Q8IY37 1157 aaKnown RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 FMR1NBQ8N0W7 255 aaPredicted RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 CNNM3Q8NE01 707 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 NEK9Q8TD19 979 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 PLIN2Q99541 437 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 EIF2AK1Q9BQI3 630 aaKnown RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 NUP62CLQ9H1M0 184 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 PDGFCQ9NRA1 345 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 DISC1Q9NRI5 854 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 FLRT1Q9NZU1 646 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 USP25Q9UHP3 1055 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 HOOK1Q9UJC3 728 aaKnown RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 DDX41Q9UJV9 622 aaKnown RBP18.51■□□□□ 0.55
ERCC4-208ENST00000576348 HPSEQ9Y251 543 aa18.51■□□□□ 0.55
ERCC4-208ENST00000576348 NOP56O00567 594 aaKnown RBP18.5■□□□□ 0.55
ERCC4-208ENST00000576348 PRMT2P55345 433 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 SPIRE1Q08AE8 756 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 CCDC183Q5T5S1 534 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
ERCC4-208ENST00000576348 RDM1Q8NG50 284 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 NT5C3AQ9H0P0 336 aa18.5■□□□□ 0.55
ERCC4-208ENST00000576348 EML1O00423 815 aa18.49■□□□□ 0.55
ERCC4-208ENST00000576348 BACH1O14867 736 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms