RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 USP38Q8NB14 1042 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 WHAMMQ8TF30 809 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 PSMD1Q99460 953 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 NOD2Q9HC29 1040 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 GRID2IPA4D2P6 1211 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 NAPAP54920 295 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 ADCY1Q08828 1119 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 ZNF662Q6ZS27 426 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 MICAL1Q8TDZ2 1067 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 PRCCQ92733 491 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-209ENST00000576012 ZNF512BQ96KM6 892 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-209ENST00000576012 FAM167BQ9BTA0 163 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TRIM6Q9C030 488 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-209ENST00000576012 MTFR1LQ9H019 292 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TMEM260Q9NX78 707 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CALM1P0DP23 149 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CALM2P0DP24 149 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CALM3P0DP25 149 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CALML3P27482 149 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 IGHMBP2P38935 993 aaKnown RBP15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TRAPPC10P48553 1259 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 HGSNATQ68CP4 663 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 SPTY2D1Q68D10 685 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-209ENST00000576012 CNNM4Q6P4Q7 775 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TEX11Q8IYF3 940 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 PNMA1Q8ND90 353 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 PIGBQ92521 554 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 TFCP2L1Q9NZI6 479 aa15.93■□□□□ 0.14
SCARF1-209ENST00000576012 A0A1B0GUA9 196 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 CCDC189A1A4V9 331 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 LRRC14Q15048 493 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 GLE1Q53GS7 698 aaKnown RBP15.92■□□□□ 0.14
SCARF1-209ENST00000576012 CCDC84Q86UT8 332 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-209ENST00000576012 KCNV2Q8TDN2 545 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 SPDL1Q96EA4 605 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 NUDT12Q9BQG2 462 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 PLA2G12BQ9BX93 195 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 ATRNO75882 1429 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 MARCH6O60337 910 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 CAND2O75155 1236 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 CCNHP51946 323 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-209ENST00000576012 SUSD4Q5VX71 490 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 SV2BQ7L1I2 683 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 DAAM2Q86T65 1068 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 CALML4Q96GE6 196 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 PNPLA7Q6ZV29 1317 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 SHBGP04278 402 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 BYSLQ13895 437 aaKnown RBP15.92■□□□□ 0.14
SCARF1-209ENST00000576012 PPP4R3AQ6IN85 833 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 EGFL6Q8IUX8 553 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 INPP4AQ96PE3 977 aaPredicted RBP15.92■□□□□ 0.14
SCARF1-209ENST00000576012 FGFBP2Q9BYJ0 223 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 BTG4Q9NY30 223 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 SLC12A6Q9UHW9 1150 aa15.92■□□□□ 0.14
SCARF1-209ENST00000576012 MROH5Q6ZUA9 1318 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 OR52Z1P0C646 297 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 ITIH3Q06033 890 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 UBAP2Q5T6F2 1119 aaKnown RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 YTHDF3Q7Z739 585 aaKnown RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 CCDC63Q8NA47 563 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 THRAP3Q9Y2W1 955 aaKnown RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 PCDH11XQ9BZA7 1347 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 PCDH11YQ9BZA8 1340 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 A0A1W2PQJ5 194 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 FOXO6A8MYZ6 492 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 ELF3P78545 371 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 TRIM28Q13263 835 aaKnown RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 PPP2R5BQ15173 497 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 ZSCAN29Q8IWY8 852 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 RIOK1Q9BRS2 568 aaKnown RBP15.91■□□□□ 0.14
SCARF1-209ENST00000576012 NR2E1Q9Y466 385 aa15.91■□□□□ 0.14
SCARF1-209ENST00000576012 A8MUI8 341 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 HSPA9P38646 679 aaKnown RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 ZNF211Q13398 564 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 TCERG1LQ5VWI1 586 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 OTUD6AQ7L8S5 288 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 SPAG5Q96R06 1193 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 UBA5Q9GZZ9 404 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 ACTR5Q9H9F9 607 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 MKNK2Q9HBH9 465 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 NOC2LQ9Y3T9 749 aaKnown RBP15.9■□□□□ 0.14
SCARF1-209ENST00000576012 BCL9LQ86UU0 1499 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 NPHP3-ACAD11A0A0J9YXS1 232 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 DDAH1O94760 285 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 ATP6V1G2O95670 118 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 MMEP08473 750 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 CHN1P15882 459 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 KLRK1P26718 216 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 KIF5BP33176 963 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 MEI1Q5TIA1 1274 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 CYTH3O43739 400 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 ABCB4P21439 1286 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 NAB2Q15742 525 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 KCNK18Q7Z418 384 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 METTL13Q8N6R0 699 aa15.9■□□□□ 0.14
SCARF1-209ENST00000576012 TBCKQ8TEA7 893 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms