RNA–Protein interactions for RNA: ENST00000575513.1

CIITA-210, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-210ENST00000575513 B4GALT4O60513 344 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 ATP9AO75110 1047 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 CIITAP33076 1130 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 ZNF76P36508 570 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 USP11P51784 963 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 MDM2Q00987 491 aaPredicted RBP15.48■□□□□ 0.07
CIITA-210ENST00000575513 RABEP1Q15276 862 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 PGBD1Q96JS3 809 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 TBC1D32Q96NH3 1257 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 GPR20Q99678 358 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 C16orf70Q9BSU1 422 aa15.48■□□□□ 0.07
CIITA-210ENST00000575513 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
CIITA-210ENST00000575513 NFASCO94856 1347 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 M0R2N6 131 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 ITGB8P26012 769 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 PSEN2P49810 448 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 MFSD5Q6N075 450 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 BLIDQ8IZY5 108 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 NECAB1Q8N987 351 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 CYP2W1Q8TAV3 490 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 BADQ92934 168 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 TRPV6Q9H1D0 765 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 BCAS3Q9H6U6 928 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 SH2B1Q9NRF2 756 aaPredicted RBP15.47■□□□□ 0.07
CIITA-210ENST00000575513 ORC3Q9UBD5 711 aaPredicted RBP15.47■□□□□ 0.07
CIITA-210ENST00000575513 SCN10AQ9Y5Y9 1956 aa15.47■□□□□ 0.07
CIITA-210ENST00000575513 FAM86B1E9PN63 330 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 H3BRB1 525 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 ADAMTS3O15072 1205 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 LARGE1O95461 756 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 FAM86B2P0C5J1 330 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 FDPSP14324 419 aaKnown RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 SETQ01105 290 aaPredicted RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 MFSD10Q14728 455 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 NPY5RQ15761 445 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 KIAA0753Q2KHM9 967 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 TDHQ8IZJ6 230 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 C7orf31Q8N865 590 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 NSUN7Q8NE18 718 aaKnown RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 SEPT1Q8WYJ6 367 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 SDF4Q9BRK5 362 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 LLPHQ9BRT6 129 aaKnown RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 PHF20Q9BVI0 1012 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 TUT1Q9H6E5 874 aaKnown RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 AGO4Q9HCK5 861 aaKnown RBP15.46■□□□□ 0.07
CIITA-210ENST00000575513 GTF2IRD1Q9UHL9 959 aa15.46■□□□□ 0.07
CIITA-210ENST00000575513 IGLV3-22A0A075B6J6 115 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 LGALS2P05162 132 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 ZNF286BP0CG31 522 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 ARP10275 920 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 FAM47CQ5HY64 1035 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 TMEM199Q8N511 208 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 RASGRP4Q8TDF6 673 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 AIFM3Q96NN9 605 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 NOC4LQ9BVI4 516 aaKnown RBP15.45■□□□□ 0.06
CIITA-210ENST00000575513 HIPK3Q9H422 1215 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 JPH1Q9HDC5 661 aaPredicted RBP15.45■□□□□ 0.06
CIITA-210ENST00000575513 TRMT13Q9NUP7 481 aaKnown RBP15.45■□□□□ 0.06
CIITA-210ENST00000575513 SLC9A2Q9UBY0 812 aa15.45■□□□□ 0.06
CIITA-210ENST00000575513 ZNF215Q9UL58 517 aaPredicted RBP15.45■□□□□ 0.06
CIITA-210ENST00000575513 CYP3A7-CYP3A51PA0A087WV96 503 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 PITPNM1O00562 1244 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 ST18O60284 1047 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 SORBS3O60504 671 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 CYP3A7P24462 503 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 FPGSQ05932 587 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 PTGISQ16647 500 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 MOXD1Q6UVY6 613 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 KRT25Q7Z3Z0 450 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 ALG1Q9BT22 464 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 TBC1D22BQ9NU19 505 aa15.44■□□□□ 0.06
CIITA-210ENST00000575513 GSTTP1A0A1W2PQM5 241 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 IPO5O00410 1097 aaKnown RBP15.43■□□□□ 0.06
CIITA-210ENST00000575513 ATG7O95352 703 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 HOXC8P31273 242 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 TCF7P36402 384 aaPredicted RBP15.43■□□□□ 0.06
CIITA-210ENST00000575513 ITGB3BPQ13352 177 aaPredicted RBP15.43■□□□□ 0.06
CIITA-210ENST00000575513 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.06
CIITA-210ENST00000575513 BFSP2Q13515 415 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 LRIT3Q3SXY7 679 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 CAGE1Q8TC20 777 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 TBCKQ8TEA7 893 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 SMARCAD1Q9H4L7 1026 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 HDAC6Q9UBN7 1215 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 KCNJ14Q9UNX9 436 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 TRIOBPQ9H2D6 2365 aa15.43■□□□□ 0.06
CIITA-210ENST00000575513 DHX15O43143 795 aaKnown RBP15.42■□□□□ 0.06
CIITA-210ENST00000575513 EDIL3O43854 480 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 LGR5O75473 907 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 GNAT1P11488 350 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 MCM2P49736 904 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 CHMP4BP1P59074 171 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
CIITA-210ENST00000575513 RBL2Q08999 1139 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 ST3GAL1Q11201 340 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 NONOQ15233 471 aaKnown RBP eCLIP15.42■□□□□ 0.06
CIITA-210ENST00000575513 Q4G0T1 1027 aa15.42■□□□□ 0.06
CIITA-210ENST00000575513 GDF6Q6KF10 455 aaPredicted RBP15.42■□□□□ 0.06
CIITA-210ENST00000575513 CCDC155Q8N6L0 562 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms