RNA–Protein interactions for RNA: ENST00000575346.1

USP43-206, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 5

Gene USP43, Length 711 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-206ENST00000575346 SCLYQ96I15 445 aa13.73□□□□□ -0.21
USP43-206ENST00000575346 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
USP43-206ENST00000575346 GPR20Q99678 358 aa13.73□□□□□ -0.21
USP43-206ENST00000575346 MTIF3Q9H2K0 278 aaKnown RBP13.73□□□□□ -0.21
USP43-206ENST00000575346 EHMT1Q9H9B1 1298 aa13.73□□□□□ -0.21
USP43-206ENST00000575346 NOD1Q9Y239 953 aa13.73□□□□□ -0.21
USP43-206ENST00000575346 LAMA2P24043 3122 aaKnown RBP13.73□□□□□ -0.21
USP43-206ENST00000575346 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 ESYT2A0FGR8 921 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 SMCO2A6NFE2 343 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 H3BRB1 525 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 NOP56O00567 594 aaKnown RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 PRPF3O43395 683 aaKnown RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 PARNO95453 639 aaKnown RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 LGALS2P05162 132 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 KCNA2P16389 499 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 PTK7Q13308 1070 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 AP3B2Q13367 1082 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 PKN1Q16512 942 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 CYFIP1Q7L576 1253 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 CCDC155Q8N6L0 562 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 RETREG2Q8NC44 543 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 AFAP1L1Q8TED9 768 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 DHX38Q92620 1227 aaKnown RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 ALG1Q9BT22 464 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 COL25A1Q9BXS0 654 aaPredicted RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 TTYH1Q9H313 450 aaPredicted RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 TUT1Q9H6E5 874 aaKnown RBP13.72□□□□□ -0.21
USP43-206ENST00000575346 JADE2Q9NQC1 790 aa13.72□□□□□ -0.21
USP43-206ENST00000575346 SCN5AQ14524 2016 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 SORBS3O60504 671 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 ATP9AO75110 1047 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 SCG2P13521 617 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 IFNAR1P17181 557 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
USP43-206ENST00000575346 ADCY7P51828 1080 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 MTMR1Q13613 665 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 TOB2Q14106 344 aaPredicted RBP13.71□□□□□ -0.21
USP43-206ENST00000575346 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
USP43-206ENST00000575346 RNF26Q9BY78 433 aaPredicted RBP13.71□□□□□ -0.21
USP43-206ENST00000575346 ANO3Q9BYT9 981 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 ZMYND12Q9H0C1 365 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
USP43-206ENST00000575346 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
USP43-206ENST00000575346 TRIP12Q14669 1992 aaPredicted RBP13.71□□□□□ -0.22
USP43-206ENST00000575346 DNAJB2P25686 324 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 SREBF1P36956 1147 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 CHMP4BP1P59074 171 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 HIC1Q14526 733 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 GPNMBQ14956 572 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 TRIM71Q2Q1W2 868 aaKnown RBP13.7□□□□□ -0.22
USP43-206ENST00000575346 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 CCDC12Q8WUD4 166 aaPredicted RBP13.7□□□□□ -0.22
USP43-206ENST00000575346 CRYGNQ8WXF5 182 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 ZNF274Q96GC6 653 aaPredicted RBP13.7□□□□□ -0.22
USP43-206ENST00000575346 MXRA8Q9BRK3 442 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 PBX4Q9BYU1 374 aa13.7□□□□□ -0.22
USP43-206ENST00000575346 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
USP43-206ENST00000575346 CXCL10P02778 98 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 CKBP12277 381 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 SELPP16109 830 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 ADAM17P78536 824 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 LRRC8DQ7L1W4 858 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 NIPA1Q7RTP0 329 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 SERINC5Q86VE9 423 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 SEPT1Q8WYJ6 367 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 IL17RAQ96F46 866 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 CDX2Q99626 313 aaPredicted RBP13.69□□□□□ -0.22
USP43-206ENST00000575346 KCNH7Q9NS40 1196 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 ZNF215Q9UL58 517 aaPredicted RBP13.69□□□□□ -0.22
USP43-206ENST00000575346 TELO2Q9Y4R8 837 aa13.69□□□□□ -0.22
USP43-206ENST00000575346 NFASCO94856 1347 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 GSTTP1A0A1W2PQM5 241 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 GRXCR1A8MXD5 290 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 MEIS1O00470 390 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 BAIAP3O94812 1187 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 CYP3A4P08684 503 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 SMIM10L2AP0DMW4 78 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 SMIM10L2BP0DMW5 78 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 ACTN1P12814 892 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 GNA11P29992 359 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 TCF7P36402 384 aaPredicted RBP13.68□□□□□ -0.22
USP43-206ENST00000575346 ANAPC15P60006 121 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 ZNF200P98182 395 aaPredicted RBP13.68□□□□□ -0.22
USP43-206ENST00000575346 RAB30Q15771 203 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 CEP55Q53EZ4 464 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 DEFB128Q7Z7B8 93 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 CYP2W1Q8TAV3 490 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 WNT8BQ93098 351 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 PHKBQ93100 1093 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 PGBD1Q96JS3 809 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 C6orf50Q9HD87 102 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 TMEM260Q9NX78 707 aa13.68□□□□□ -0.22
USP43-206ENST00000575346 SLC4A7Q9Y6M7 1214 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms