RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 ZNF202O95125 648 aa27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 CAP1Q01518 475 aa27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 KARSQ15046 597 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 ZRSR1Q15695 479 aaKnown RBP27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 CCSER1Q9C0I3 900 aa27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 UNC45AQ9H3U1 944 aa27.06■■□□□ 1.92
ATPAF1-213ENST00000574428 KINO60870 393 aaKnown RBP27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 KCNA2P16389 499 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 CYP2B6P20813 491 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 ICAM3P32942 547 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 RGS2P41220 211 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 PPP2R5CQ13362 524 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 MAMDC4Q6UXC1 1216 aa27.05■■□□□ 1.92
ATPAF1-213ENST00000574428 HOXC6P09630 235 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 RASSF8Q8NHQ8 419 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 SNX29Q8TEQ0 813 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 TBC1D22BQ9NU19 505 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 DDX19AQ9NUU7 478 aaKnown RBP27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 EML1O00423 815 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 SP2Q02086 613 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 DHX58Q96C10 678 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 PLIN2Q99541 437 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 APBA2Q99767 749 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 TINF2Q9BSI4 451 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 GZF1Q9H116 711 aaPredicted RBP27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 BCAS3Q9H6U6 928 aa27.04■■□□□ 1.92
ATPAF1-213ENST00000574428 SORBS3O60504 671 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 KIF22Q14807 665 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 CCL14Q16627 93 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 LONRF3Q496Y0 759 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 KRT79Q5XKE5 535 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 SDF4Q9BRK5 362 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 SAGE1Q9NXZ1 904 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 FLRT1Q9NZU1 646 aa27.03■■□□□ 1.92
ATPAF1-213ENST00000574428 GPR25O00155 361 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 SNAI1O95863 264 aaPredicted RBP27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 CAMK4Q16566 473 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 B3GNT9Q6UX72 402 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 CD99L2Q8TCZ2 262 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 DISC1Q9NRI5 854 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 GABRQQ9UN88 632 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 SYNGAP1Q96PV0 1343 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 UBA1P22314 1058 aaKnown RBP27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 CCDC183Q5T5S1 534 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 SYAP1Q96A49 352 aaPredicted RBP27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 NUP62CLQ9H1M0 184 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 CLSTN2Q9H4D0 955 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 PDGFCQ9NRA1 345 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 CCDC39Q9UFE4 941 aa27.02■■□□□ 1.92
ATPAF1-213ENST00000574428 ARIH2O95376 493 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 CCT6AP40227 531 aaKnown RBP27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 ERMNQ8TAM6 284 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 KATNBL1Q9H079 304 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 VTA1Q9NP79 307 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 SERTAD1Q9UHV2 236 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 DOCK5Q9H7D0 1870 aa27.01■■□□□ 1.91
ATPAF1-213ENST00000574428 CCNE2O96020 404 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 PLCG1P19174 1290 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 GRB10Q13322 594 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 E2F4Q16254 413 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 MSL3Q8N5Y2 521 aaKnown RBP27■■□□□ 1.91
ATPAF1-213ENST00000574428 CALML4Q96GE6 196 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 PNMA5Q96PV4 448 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 NFASCO94856 1347 aa27■■□□□ 1.91
ATPAF1-213ENST00000574428 ACTN4O43707 911 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 STAT6P42226 847 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 PRKCZQ05513 592 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 ECM1Q16610 540 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 LY6KQ17RY6 165 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 RRAGBQ5VZM2 374 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 KRBA2Q6ZNG9 492 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 CNNM3Q8NE01 707 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 LRRC15Q8TF66 581 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 EIF2AK1Q9BQI3 630 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 JPH1Q9HDC5 661 aaPredicted RBP26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 TCEAL9Q9UHQ7 104 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 TSKSQ9UJT2 592 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 MED24O75448 989 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 TGFB3P10600 412 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 FLT3LGP49771 235 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 KRT76Q01546 638 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 SP4Q02446 784 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 MAP2K1Q02750 393 aaPredicted RBP26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 CYP4A11Q02928 519 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 HAUS3Q68CZ6 603 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 TAPT1Q6NXT6 567 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 CYFIP1Q7L576 1253 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 MIER3Q7Z3K6 550 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 IQUBQ8NA54 791 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 CDK5RAP3Q96JB5 506 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 SENP7Q9BQF6 1050 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 DDX41Q9UJV9 622 aaKnown RBP26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 TELO2Q9Y4R8 837 aa26.99■■□□□ 1.91
ATPAF1-213ENST00000574428 POTEB3A0JP26 581 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 TMEM63BQ5T3F8 832 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 OLFML2BQ68BL8 750 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 KCNV1Q6PIU1 500 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 POTEBQ6S5H4 581 aa26.98■■□□□ 1.91
ATPAF1-213ENST00000574428 SCFD2Q8WU76 684 aa26.98■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms