RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 MEIS2O14770 477 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 HSPA4P34932 840 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 MRPS9P82933 396 aaKnown RBP11.49□□□□□ -0.57
RPA1-206ENST00000573994 SEMA3FQ13275 785 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 CELF3Q5SZQ8 465 aaKnown RBP11.49□□□□□ -0.57
RPA1-206ENST00000573994 ZNF697Q5TEC3 545 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 WWC2Q6AWC2 1192 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 NFRKBQ6P4R8 1299 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 PSRC1Q6PGN9 363 aaPredicted RBP11.49□□□□□ -0.57
RPA1-206ENST00000573994 EMID1Q96A84 441 aaPredicted RBP11.49□□□□□ -0.57
RPA1-206ENST00000573994 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 GUCD1Q96NT3 240 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 ALG1Q9BT22 464 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 BCAS3Q9H6U6 928 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 IL23AQ9NPF7 189 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 RBM28Q9NW13 759 aaKnown RBP11.49□□□□□ -0.57
RPA1-206ENST00000573994 NOD1Q9Y239 953 aa11.49□□□□□ -0.57
RPA1-206ENST00000573994 SCN10AQ9Y5Y9 1956 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 GRXCR1A8MXD5 290 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 PIK3CDO00329 1044 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 SUPT20HL2P0C7V6 817 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 CASTP20810 708 aaKnown RBP11.48□□□□□ -0.57
RPA1-206ENST00000573994 CDC27P30260 824 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 PSEN2P49810 448 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 SMAD3P84022 425 aaKnown RBP11.48□□□□□ -0.57
RPA1-206ENST00000573994 SP4Q02446 784 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 APOBRQ0VD83 1088 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 MFSD10Q14728 455 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 HSDL1Q3SXM5 330 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 MYSM1Q5VVJ2 828 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 GDF6Q6KF10 455 aaPredicted RBP11.48□□□□□ -0.57
RPA1-206ENST00000573994 TYW1BQ6NUM6 668 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 BLOC1S2Q6QNY1 142 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 Q6ZUG5 572 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 OTOP2Q7RTS6 562 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 KCNB2Q92953 911 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 BRF1Q92994 677 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 INPP4AQ96PE3 977 aaPredicted RBP11.48□□□□□ -0.57
RPA1-206ENST00000573994 PSTPIP2Q9H939 334 aa11.48□□□□□ -0.57
RPA1-206ENST00000573994 CXXC1Q9P0U4 656 aaPredicted RBP11.48□□□□□ -0.57
RPA1-206ENST00000573994 REC8O95072 547 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 F2P00734 622 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 HMGB1P09429 215 aaKnown RBP11.47□□□□□ -0.57
RPA1-206ENST00000573994 RPS6KB1P23443 525 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 METAP2P50579 478 aaKnown RBP eCLIP11.47□□□□□ -0.579e-6■■■■□ 23.9
RPA1-206ENST00000573994 NAPAP54920 295 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 FUT2Q10981 343 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 PTGISQ16647 500 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 KIAA0753Q2KHM9 967 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 GNPTABQ3T906 1256 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 ERICH6BQ5W0A0 696 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 PCNX4Q63HM2 1172 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 KCNV1Q6PIU1 500 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 CYFIP1Q7L576 1253 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 DEFB128Q7Z7B8 93 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 TRIM50Q86XT4 487 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 C7orf31Q8N865 590 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 ZNF454Q8N9F8 522 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 DHX38Q92620 1227 aaKnown RBP11.47□□□□□ -0.57
RPA1-206ENST00000573994 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 CTAGE1Q96RT6 745 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 KATNAL1Q9BW62 490 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 TTYH1Q9H313 450 aaPredicted RBP11.47□□□□□ -0.57
RPA1-206ENST00000573994 MLXIPQ9HAP2 919 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
RPA1-206ENST00000573994 PKD2L1Q9P0L9 805 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 HDAC6Q9UBN7 1215 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
RPA1-206ENST00000573994 SPDYE3A6NKU9 549 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 ZBBXA8MT70 800 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 STXBP3O00186 592 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 NOP56O00567 594 aaKnown RBP11.46□□□□□ -0.57
RPA1-206ENST00000573994 FIBPO43427 364 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 PPFIA3O75145 1194 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 HOXD8P13378 290 aaPredicted RBP11.46□□□□□ -0.57
RPA1-206ENST00000573994 DNAJB2P25686 324 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 ZNF200P98182 395 aaPredicted RBP11.46□□□□□ -0.57
RPA1-206ENST00000573994 PTPN11Q06124 597 aaPredicted RBP11.46□□□□□ -0.57
RPA1-206ENST00000573994 RASIP1Q5U651 963 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 HERVK_113Q902F9 699 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 PPP4R2Q9NY27 417 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 GTF2IRD1Q9UHL9 959 aa11.46□□□□□ -0.57
RPA1-206ENST00000573994 V9GY48 417 aaPredicted RBP11.46□□□□□ -0.57
RPA1-206ENST00000573994 EYSQ5T1H1 3165 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 CHD9Q3L8U1 2897 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.45□□□□□ -0.58
RPA1-206ENST00000573994 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.45□□□□□ -0.58
RPA1-206ENST00000573994 SPATA31C2B4DYI2 1134 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 EPB41L2O43491 1005 aaKnown RBP11.45□□□□□ -0.58
RPA1-206ENST00000573994 STAM2O75886 525 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 FGBP02675 491 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 LGALS2P05162 132 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 TGFB3P10600 412 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 ITGB5P18084 799 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 ICAM3P32942 547 aa11.45□□□□□ -0.58
RPA1-206ENST00000573994 ADD1P35611 737 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms