RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 PLSCR4Q9NRQ2 329 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 C14orf119Q9NWQ9 140 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 CEP72Q9P209 647 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 GPN3Q9UHW5 284 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 SALL4Q9UJQ4 1053 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZNF214Q9UL59 606 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 PADI4Q9UM07 663 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 ZKSCAN5Q9Y2L8 839 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 KNSTRNQ9Y448 316 aa5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 GPC6Q9Y625 555 aaPredicted RBP5.72□□□□□ -1.49
TOPBP1-210ENST00000572787 RTCAO00442 366 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 AHCYL1O43865 530 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 LILRA1O75019 489 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 NME1P15531 152 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 PEX2P28328 305 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 GGCXP38435 758 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 TXLNAP40222 546 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 KCNJ6P48051 423 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 DRG2P55039 364 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 PPP2R3AQ06190 1150 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 PRKG1Q13976 671 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 SCARB2Q14108 478 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 BBS9Q3SYG4 887 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 RNF220Q5VTB9 566 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 TREML4Q6UXN2 200 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 OTUD6AQ7L8S5 288 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 KIAA0319LQ8IZA0 1049 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 NXPE1Q8N323 547 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF527Q8NB42 609 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 ZMIZ2Q8NF64 920 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 UCMAQ8WVF2 138 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 TEKT5Q96M29 485 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 C22orf23Q9BZE7 217 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 BHMT2Q9H2M3 363 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 PRDM5Q9NQX1 630 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 TMEM39AQ9NV64 488 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 GMIPQ9P107 970 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 SAMD15Q9P1V8 674 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 CPSF2Q9P2I0 782 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 ZHX1Q9UKY1 873 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 BLOC1S6Q9UL45 172 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 AGTPBP1Q9UPW5 1226 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 SOS1Q07889 1333 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 PRR36Q9H6K5 1346 aa5.71□□□□□ -1.5
TOPBP1-210ENST00000572787 H3BML4 177 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 CBX4O00257 560 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 TNFRSF10CO14798 259 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 MGEA5O60502 916 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 XYLBO75191 536 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 SLC3A2P08195 630 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 PIK3CBP42338 1070 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 TNNT3P45378 269 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 HSD17B7P56937 341 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 IRX3P78415 501 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 LRRC32Q14392 662 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 MBTPS1Q14703 1052 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 ACAP2Q15057 778 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 PPP2R5BQ15173 497 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 SCARA3Q6AZY7 606 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 SLC30A6Q6NXT4 461 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 TATDN1Q6P1N9 297 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 LILRA6Q6PI73 481 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 USP51Q70EK9 711 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 NLRC3Q7RTR2 1065 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 MAMDC2Q7Z304 686 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 GALNTL5Q7Z4T8 443 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 RTKN2Q8IZC4 609 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 MIER2Q8N344 545 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 CLRN3Q8NCR9 226 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 SPATA18Q8TC71 538 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 JAKMIP2Q96AA8 810 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 ATG4CQ96DT6 458 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 C1GALT1C1Q96EU7 318 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 FHDC1Q9C0D6 1143 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 C11orf16Q9NQ32 467 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 DMRT3Q9NQL9 472 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 STARD7Q9NQZ5 370 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 DISC1Q9NRI5 854 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 VPS45Q9NRW7 570 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 PIH1D1Q9NWS0 290 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 DACT1Q9NYF0 836 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 GGA3Q9NZ52 723 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 AASSQ9UDR5 926 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 GTF3C4Q9UKN8 822 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 L1RE1Q9UN81 338 aa5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 MAGED2Q9UNF1 606 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-210ENST00000572787 RHPN2P1A8MT19 583 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 KIF5CO60282 957 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 TBCAO75347 108 aaKnown RBP5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 HTR3BO95264 441 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 HSPA4LO95757 839 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 EGFRP00533 1210 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 POLBP06746 335 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ITGAVP06756 1048 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 POU2F2P09086 479 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ATP1A3P13637 1013 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 ALOX12P18054 663 aa5.69□□□□□ -1.5
TOPBP1-210ENST00000572787 BMP6P22004 513 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms