RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 SUPT20HL2P0C7V6 817 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 HOXD8P13378 290 aaPredicted RBP23.58■■□□□ 1.37
CHMP6-204ENST00000572778 KCNA2P16389 499 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 GTF3C6Q969F1 213 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 KIF2CQ99661 725 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 KCNH7Q9NS40 1196 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 GTF3C3Q9Y5Q9 886 aa23.58■■□□□ 1.37
CHMP6-204ENST00000572778 STK36Q9NRP7 1315 aa23.58■■□□□ 1.36
CHMP6-204ENST00000572778 A0A1W2PPC1 479 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 F2P00734 622 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 RBM25P49756 843 aaKnown RBP23.57■■□□□ 1.36
CHMP6-204ENST00000572778 PTPN11Q06124 597 aaPredicted RBP23.57■■□□□ 1.36
CHMP6-204ENST00000572778 MFSD10Q14728 455 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 TDHQ8IZJ6 230 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 GPR20Q99678 358 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 ORC3Q9UBD5 711 aaPredicted RBP23.57■■□□□ 1.36
CHMP6-204ENST00000572778 PCDHA4Q9UN74 947 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 TELO2Q9Y4R8 837 aa23.57■■□□□ 1.36
CHMP6-204ENST00000572778 ARP10275 920 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 KIAA0753Q2KHM9 967 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 C7orf31Q8N865 590 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 HIPK3Q9H422 1215 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 LIMCH1Q9UPQ0 1083 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 NOD1Q9Y239 953 aa23.56■■□□□ 1.36
CHMP6-204ENST00000572778 MEIS1O00470 390 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 LGALS2P05162 132 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 CYP3A4P08684 503 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 CYP2C9P11712 490 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 XBP1P17861 261 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 CYP2C18P33260 490 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 FPGSQ05932 587 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 UTP14CQ5TAP6 766 aaKnown RBP23.55■■□□□ 1.36
CHMP6-204ENST00000572778 MFSD5Q6N075 450 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 PLA2G4DQ86XP0 818 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 BLIDQ8IZY5 108 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 C16orf70Q9BSU1 422 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 KCNJ14Q9UNX9 436 aa23.55■■□□□ 1.36
CHMP6-204ENST00000572778 HAS3O00219 553 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 PTGISQ16647 500 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 GALNT17Q6IS24 598 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 FAM177A1Q8N128 213 aaPredicted RBP23.54■■□□□ 1.36
CHMP6-204ENST00000572778 CRYGNQ8WXF5 182 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 WASF1Q92558 559 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 AGO4Q9HCK5 861 aaKnown RBP23.54■■□□□ 1.36
CHMP6-204ENST00000572778 HDAC6Q9UBN7 1215 aa23.54■■□□□ 1.36
CHMP6-204ENST00000572778 FAM86B1E9PN63 330 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 H3BRB1 525 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 FAM86B2P0C5J1 330 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 GDF6Q6KF10 455 aaPredicted RBP23.53■■□□□ 1.36
CHMP6-204ENST00000572778 NIPA1Q7RTP0 329 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 SESTD1Q86VW0 696 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 TMEM199Q8N511 208 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 NSUN7Q8NE18 718 aaKnown RBP23.53■■□□□ 1.36
CHMP6-204ENST00000572778 SEPT1Q8WYJ6 367 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 SDF4Q9BRK5 362 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 NOC4LQ9BVI4 516 aaKnown RBP23.53■■□□□ 1.36
CHMP6-204ENST00000572778 TUT1Q9H6E5 874 aaKnown RBP23.53■■□□□ 1.36
CHMP6-204ENST00000572778 GTF2IRD1Q9UHL9 959 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 UMODL1Q5DID0 1318 aa23.53■■□□□ 1.36
CHMP6-204ENST00000572778 FDPSP14324 419 aaKnown RBP23.52■■□□□ 1.36
CHMP6-204ENST00000572778 TCF7P36402 384 aaPredicted RBP23.52■■□□□ 1.36
CHMP6-204ENST00000572778 CCL23P55773 120 aa23.52■■□□□ 1.36
CHMP6-204ENST00000572778 TRIM50Q86XT4 487 aa23.52■■□□□ 1.36
CHMP6-204ENST00000572778 DAGLBQ8NCG7 672 aa23.52■■□□□ 1.36
CHMP6-204ENST00000572778 JPH1Q9HDC5 661 aaPredicted RBP23.52■■□□□ 1.36
CHMP6-204ENST00000572778 GJB4Q9NTQ9 266 aa23.52■■□□□ 1.36
CHMP6-204ENST00000572778 SLC9A2Q9UBY0 812 aa23.52■■□□□ 1.36
CHMP6-204ENST00000572778 JAK2O60674 1132 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 CSF2RAP15509 400 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 EPHB4P54760 987 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 RABEP1Q15276 862 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 SHHQ15465 462 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 CCDC83Q8IWF9 413 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 TBCKQ8TEA7 893 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 UIMC1Q96RL1 719 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 PHF20Q9BVI0 1012 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 ZNF215Q9UL58 517 aaPredicted RBP23.51■■□□□ 1.35
CHMP6-204ENST00000572778 NFASCO94856 1347 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 SCN10AQ9Y5Y9 1956 aa23.51■■□□□ 1.35
CHMP6-204ENST00000572778 LTBP2Q14767 1821 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 IGLV3-22A0A075B6J6 115 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 GSTTP1A0A1W2PQM5 241 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 DDX39AO00148 427 aaKnown RBP23.5■■□□□ 1.35
CHMP6-204ENST00000572778 FXR1P51114 621 aaKnown RBP eCLIP23.5■■□□□ 1.35
CHMP6-204ENST00000572778 ST3GAL1Q11201 340 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 ITGB3BPQ13352 177 aaPredicted RBP23.5■■□□□ 1.35
CHMP6-204ENST00000572778 PPIGQ13427 754 aaKnown RBP eCLIP23.5■■□□□ 1.357e-8■■■□□ 18.1
CHMP6-204ENST00000572778 NPY5RQ15761 445 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 PRR16Q569H4 304 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 C9orf50Q5SZB4 431 aa23.5■■□□□ 1.35
CHMP6-204ENST00000572778 ZSCAN31Q96LW9 406 aaPredicted RBP23.5■■□□□ 1.35
CHMP6-204ENST00000572778 M0R2N6 131 aa23.49■■□□□ 1.35
CHMP6-204ENST00000572778 CIITAP33076 1130 aa23.49■■□□□ 1.35
CHMP6-204ENST00000572778 USP11P51784 963 aa23.49■■□□□ 1.35
CHMP6-204ENST00000572778 SETQ01105 290 aaPredicted RBP23.49■■□□□ 1.35
CHMP6-204ENST00000572778 ZNF577Q9BSK1 485 aa23.49■■□□□ 1.35
CHMP6-204ENST00000572778 MYH7BA7E2Y1 1941 aa23.49■■□□□ 1.35
CHMP6-204ENST00000572778 IPO5O00410 1097 aaKnown RBP23.48■■□□□ 1.35
CHMP6-204ENST00000572778 FOSBP53539 338 aa23.48■■□□□ 1.35
CHMP6-204ENST00000572778 ZNF200P98182 395 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms