RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 GTF2IRD2Q86UP8 949 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 AFAP1Q8N556 730 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 ALG3Q92685 438 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 NKX2-4Q9H2Z4 354 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 RXFP1Q9HBX9 757 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 LUC7LQ9NQ29 371 aaKnown RBP4.79□□□□□ -1.64
CDC27-211ENST00000570740 GPRC5CQ9NQ84 441 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 CYP26B1Q9NR63 512 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 CLEC1BQ9P126 229 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 NUDT5Q9UKK9 219 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 ADAMTSL3P82987 1691 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 ADGBQ8N7X0 1667 aa4.79□□□□□ -1.64
CDC27-211ENST00000570740 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.78□□□□□ -1.64
CDC27-211ENST00000570740 KIDINS220Q9ULH0 1771 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 NCANO14594 1321 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 SYCP2Q9BX26 1530 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 ARHGEF12Q9NZN5 1544 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 BCORL1Q5H9F3 1711 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 CCDC141Q6ZP82 1450 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 OTOL1A6NHN0 477 aaPredicted RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 B8ZZF3 427 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 PRRG2O14669 202 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 ZBTB7AO95365 584 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 PLA2G1BP04054 148 aaKnown RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 THBDP07204 575 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 TCF3P15923 654 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 PMLP29590 882 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 ETFBP38117 255 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 SSR1P43307 286 aaKnown RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 IRX6P78412 446 aaPredicted RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 HTRA3P83110 453 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 CYP4F3Q08477 520 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 GNL2Q13823 731 aaKnown RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 SLC9A5Q14940 896 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 HS1BP3Q53T59 392 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 MBLAC2Q68D91 279 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 WWC2Q6AWC2 1192 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 C6orf15Q6UXA7 325 aaPredicted RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 FAM178BQ8IXR5 827 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 SP8Q8IXZ3 490 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 FNIP1Q8TF40 1166 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 RELTQ969Z4 430 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 PPP1R14AQ96A00 147 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 LGR4Q9BXB1 951 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 RTEL1Q9NZ71 1219 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 PRKAG3Q9UGI9 489 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 CNTLNQ9NXG0 1405 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 TRAPPC8Q9Y2L5 1435 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 INO80Q9ULG1 1556 aaPredicted RBP4.78□□□□□ -1.64
CDC27-211ENST00000570740 MAST1Q9Y2H9 1570 aa4.78□□□□□ -1.64
CDC27-211ENST00000570740 ATP7AQ04656 1500 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 CAMSAP2Q08AD1 1489 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 TCOF1Q13428 1488 aaKnown RBP4.77□□□□□ -1.65
CDC27-211ENST00000570740 SHANK2Q9UPX8 1470 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 SETD1BQ9UPS6 1966 aaKnown RBP4.77□□□□□ -1.65
CDC27-211ENST00000570740 B2RBV5 119 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FUCA1P04066 466 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FGRP09769 529 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 MC3RP41968 323 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 HNRNPMP52272 730 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC27-211ENST00000570740 BECN1Q14457 450 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 INF2Q27J81 1249 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 VWA3BQ502W6 1294 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 LARP1BQ659C4 914 aaKnown RBP4.77□□□□□ -1.65
CDC27-211ENST00000570740 CASC1Q6TDU7 716 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 B3GNT8Q7Z7M8 397 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 NPLOC4Q8TAT6 608 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FEZF2Q8TBJ5 459 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 PLEKHO2Q8TD55 490 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 USP33Q8TEY7 942 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FRS2Q8WU20 508 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 CPA5Q8WXQ8 436 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 DPF3Q92784 378 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC27-211ENST00000570740 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 BCAS3Q9H6U6 928 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FAN1Q9Y2M0 1017 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 KIF3AQ9Y496 699 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 PMF1-BGLAPU3KQ54 211 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 FGD6Q6ZV73 1430 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 DIP2CQ9Y2E4 1556 aa4.77□□□□□ -1.65
CDC27-211ENST00000570740 A2MP01023 1474 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 ADAMTS20P59510 1910 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 TBX1O43435 398 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 SUSD5O60279 629 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 NTRK1P04629 796 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 ZSCAN20P17040 1043 aaPredicted RBP4.76□□□□□ -1.65
CDC27-211ENST00000570740 MSNP26038 577 aaKnown RBP4.76□□□□□ -1.65
CDC27-211ENST00000570740 HOXC12P31275 282 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 LMOD3Q0VAK6 560 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 NFIXQ14938 502 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 FXNQ16595 210 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 SV2CQ496J9 727 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 E4F1Q66K89 784 aaPredicted RBP4.76□□□□□ -1.65
CDC27-211ENST00000570740 IQCEQ6IPM2 695 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 SAPCD2Q86UD0 394 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 CREBRFQ8IUR6 639 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 BTN2A2Q8WVV5 523 aa4.76□□□□□ -1.65
CDC27-211ENST00000570740 MARCH2Q9P0N8 246 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms