RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 SDF4Q9BRK5 362 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 VTA1Q9NP79 307 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 HPSEQ9Y251 543 aa17.36■□□□□ 0.37
HERPUD1-219ENST00000570273 MGAMO43451 1857 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 ATP9AO75110 1047 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 HSPA8P11142 646 aaKnown RBP17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 KCNA2P16389 499 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 SYKP43405 635 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 PRKCZQ05513 592 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 SPIRE1Q08AE8 756 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 PPP2R5CQ13362 524 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 CCL14Q16627 93 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 KRT79Q5XKE5 535 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 ERMNQ8TAM6 284 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 SNX29Q8TEQ0 813 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 ERO1AQ96HE7 468 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 UNC45AQ9H3U1 944 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 KCNH3Q9ULD8 1083 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 GABRQQ9UN88 632 aa17.35■□□□□ 0.37
HERPUD1-219ENST00000570273 DHX15O43143 795 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 KINO60870 393 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 NR1I2O75469 434 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 NFASCO94856 1347 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 SNAI1O95863 264 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 UBA1P22314 1058 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 FLT3LGP49771 235 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 CAP1Q01518 475 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 ZRSR1Q15695 479 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 OLFML2BQ68BL8 750 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 KCNV1Q6PIU1 500 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 OTOP1Q7RTM1 612 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 PDILTQ8N807 584 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 DDX19AQ9NUU7 478 aaKnown RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 FLRT1Q9NZU1 646 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 ZHX1Q9UKY1 873 aaPredicted RBP17.34■□□□□ 0.37
HERPUD1-219ENST00000570273 SORBS3O60504 671 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 HOXD10P28358 340 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 KRT76Q01546 638 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 TTLL4Q14679 1199 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 KARSQ15046 597 aaKnown RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 HAUS3Q68CZ6 603 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CAVIN1Q6NZI2 390 aaKnown RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 FMR1NBQ8N0W7 255 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 ENGASEQ8NFI3 743 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 SCFD2Q8WU76 684 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 ZNF296Q8WUU4 475 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CALML4Q96GE6 196 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CDK5RAP3Q96JB5 506 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 PANK2Q9BZ23 570 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CCSER1Q9C0I3 900 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 CCDC39Q9UFE4 941 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 STK24Q9Y6E0 443 aa17.33■□□□□ 0.36
HERPUD1-219ENST00000570273 KDM3AQ9Y4C1 1321 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 EML1O00423 815 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 POLR2DO15514 142 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 TGFB3P10600 412 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 XRCC5P13010 732 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 CCT6AP40227 531 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 SNW1Q13573 536 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 NEDD9Q14511 834 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 ARHGEF6Q15052 776 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 MIER3Q7Z3K6 550 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 SYAP1Q96A49 352 aaPredicted RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 DHX58Q96C10 678 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 PYM1Q9BRP8 204 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 MMTAG2Q9BU76 263 aaKnown RBP17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 KATNBL1Q9H079 304 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 PDGFCQ9NRA1 345 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 SRRDQ9UH36 339 aa17.32■□□□□ 0.36
HERPUD1-219ENST00000570273 A0A087X0B3 334 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 ZNF202O95125 648 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 ARIH2O95376 493 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 GGPS1O95749 300 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 CYP2C19P33261 490 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 JAK3P52333 1124 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 SP2Q02086 613 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 SP4Q02446 784 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 ACVR2BQ13705 512 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 LY6KQ17RY6 165 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 RRAGBQ5VZM2 374 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 ZNF746Q6NUN9 644 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 TAPT1Q6NXT6 567 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 B3GNT9Q6UX72 402 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 CYFIP1Q7L576 1253 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 GIMAP8Q8ND71 665 aaPredicted RBP17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 DISC1Q9NRI5 854 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 SLC9A2Q9UBY0 812 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 DDX41Q9UJV9 622 aaKnown RBP17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 MCM3APO60318 1980 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 DOCK3Q8IZD9 2030 aa17.31■□□□□ 0.36
HERPUD1-219ENST00000570273 RBM47A0AV96 593 aaKnown RBP17.3■□□□□ 0.36
HERPUD1-219ENST00000570273 WDR64B1ANS9 1081 aa17.3■□□□□ 0.36
HERPUD1-219ENST00000570273 SLC26A4O43511 780 aa17.3■□□□□ 0.36
HERPUD1-219ENST00000570273 CCNE2O96020 404 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms