RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ANKRD2Q9GZV1 360 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 ZCCHC17Q9NP64 241 aaKnown RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 CWC25Q9NXE8 425 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 CCL15-CCL14A0A0B4J2E2 113 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TIAF1O95411 115 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 GJB1P08034 283 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 COL8A1P27658 744 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TMPOP42166 694 aaKnown RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 LACTBP83111 547 aaPredicted RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 INSM1Q01101 510 aaPredicted RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TNFAIP1Q13829 316 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 RASA3Q14644 834 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 CCL15Q16663 113 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 KRT24Q2M2I5 525 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TNNI3KQ59H18 835 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TMEM201Q5SNT2 666 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 RUFY4Q6ZNE9 571 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 DYMQ7RTS9 669 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TXNRD3Q86VQ6 643 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 RNF214Q8ND24 703 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TTLL11Q8NHH1 800 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 BRI3BPQ8WY22 251 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 SCARF2Q96GP6 870 aaPredicted RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 MYD88Q99836 296 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 CHMP4AQ9BY43 222 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 ATXN3LQ9H3M9 355 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 ADAM30Q9UKF2 790 aa7.58□□□□□ -1.2
UBFD1-209ENST00000569919 R3HCC1Q9Y3T6 440 aaKnown RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 LAS1LQ9Y4W2 734 aaKnown RBP7.58□□□□□ -1.2
UBFD1-209ENST00000569919 TRIOBPQ9H2D6 2365 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 COL4A1P02462 1669 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 MEIS3P2A8K0S8 358 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 DNAJA2O60884 412 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 CETPP11597 493 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 NTF4P34130 210 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 IGHMBP2P38935 993 aaKnown RBP7.57□□□□□ -1.2
UBFD1-209ENST00000569919 FKBP1AP62942 108 aaKnown RBP7.57□□□□□ -1.2
UBFD1-209ENST00000569919 RAB33AQ14088 237 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 TTLL4Q14679 1199 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 CFAP100Q494V2 611 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 DUSP27Q5VZP5 1158 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 ANKRD34AQ69YU3 496 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 UBE2Q1Q7Z7E8 422 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 TMEM40Q8WWA1 233 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 ACSF2Q96CM8 615 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-209ENST00000569919 PRMT6Q96LA8 375 aaPredicted RBP7.57□□□□□ -1.2
UBFD1-209ENST00000569919 TRIM55Q9BYV6 548 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 OSBPL2Q9H1P3 480 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 AKTIPQ9H8T0 292 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 VEZTQ9HBM0 779 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 CD209Q9NNX6 404 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 GMIPQ9P107 970 aa7.57□□□□□ -1.2
UBFD1-209ENST00000569919 MKI67P46013 3256 aaKnown RBP7.57□□□□□ -1.2
UBFD1-209ENST00000569919 CLRN2A0PK11 232 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 DDX58O95786 925 aaKnown RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ASPAP45381 313 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 KCNJ4P48050 445 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 RBM5P52756 815 aaKnown RBP eCLIP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 CTSWP56202 376 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 UBXN2AP68543 259 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 PPP2R5EQ16537 467 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 OVOS1Q6IE37 1185 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 FAM43AQ8N2R8 423 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 C2CD4AQ8NCU7 369 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ZNF507Q8TCN5 953 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 RAET1EQ8TD07 263 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 SHISA4Q96DD7 197 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ATG4CQ96DT6 458 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 MPHOSPH8Q99549 860 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ARHGAP39Q9C0H5 1083 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 GSX1Q9H4S2 264 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 PHAXQ9H814 394 aaKnown RBP7.56□□□□□ -1.2
UBFD1-209ENST00000569919 SRRDQ9UH36 339 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 KLHL3Q9UH77 587 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 STXBP5LQ9Y2K9 1186 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 ACTL7BQ9Y614 415 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 LAMB1P07942 1786 aa7.56□□□□□ -1.2
UBFD1-209ENST00000569919 CHURC1-FNTBB4DL54 471 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 C9orf172C9J069 976 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 F8W031 263 aaPredicted RBP7.55□□□□□ -1.2
UBFD1-209ENST00000569919 RNGTTO60942 597 aaKnown RBP7.55□□□□□ -1.2
UBFD1-209ENST00000569919 SGPL1O95470 568 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 CCL5P13501 91 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 BMP8BP34820 402 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 PSMC4P43686 418 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 CASP7P55210 303 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 SERINC3Q13530 473 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 C17orf99Q6UX52 265 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 C15orf52Q6ZUT6 534 aaKnown RBP7.55□□□□□ -1.2
UBFD1-209ENST00000569919 HID1Q8IV36 788 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 MCATQ8IVS2 390 aaKnown RBP7.55□□□□□ -1.2
UBFD1-209ENST00000569919 CERS5Q8N5B7 392 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 DEFB123Q8N688 67 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 NACC1Q96RE7 527 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 TM9SF2Q99805 663 aa7.55□□□□□ -1.2
UBFD1-209ENST00000569919 TNKS2Q9H2K2 1166 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms