RNA–Protein interactions for RNA: ENST00000569715.5

PDXDC1-216, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 3,775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-216ENST00000569715 MTMR1Q13613 665 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 KCNB1Q14721 858 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 RIOX2Q8IUF8 465 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 AGO4Q9HCK5 861 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 JADE2Q9NQC1 790 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 SYNRGQ9UMZ2 1314 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 DHX15O43143 795 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 BCRP11274 1271 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 CTTNQ14247 550 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 B3GNT9Q6UX72 402 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 ERMNQ8TAM6 284 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 DDX12PQ92771 950 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 TRIM44Q96DX7 344 aaPredicted RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 MOV10L1Q9BXT6 1211 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 NPHP3-ACAD11A0A0J9YXS1 232 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 TESPA1A2RU30 521 aaPredicted RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 NR3C2P08235 984 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 PLA2G4BP0C869 781 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 AMPD3Q01432 767 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 FSTL1Q12841 308 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 FASTKD5Q7L8L6 764 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 NIPA1Q7RTP0 329 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 NCAPG2Q86XI2 1143 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 ENOX1Q8TC92 643 aaKnown RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 WRAP73Q9P2S5 460 aaPredicted RBP12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 RBPJLQ9UBG7 517 aa12.23□□□□□ -0.45
PDXDC1-216ENST00000569715 ATP9AO75110 1047 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 CYP2C8P10632 490 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 ERCC5P28715 1186 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 PDE4DQ08499 809 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 STK4Q13043 487 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 CHST13Q8NET6 341 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 HSD17B14Q9BPX1 270 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 TEKT3Q9BXF9 490 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 SAMSN1Q9NSI8 373 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 RGS20O76081 388 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 RAD51AP2Q09MP3 1159 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 PABPC4Q13310 644 aaKnown RBP eCLIP12.22□□□□□ -0.456e-11■■■□□ 18.3
PDXDC1-216ENST00000569715 Q3C1V9 767 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 CST9Q5W186 159 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 VSIG10LQ86VR7 867 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 GIMAP8Q8ND71 665 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 DNAJC19Q96DA6 116 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 MS4A4AQ96JQ5 239 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 ZBTB39O15060 712 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 SLITRK3O94933 977 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 SLC12A3P55017 1021 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 SEMA3FQ13275 785 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 GPBP1Q86WP2 473 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 POLR3CQ9BUI4 534 aaPredicted RBP12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 IFNKQ9P0W0 207 aa12.22□□□□□ -0.45
PDXDC1-216ENST00000569715 PTMAP06454 111 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 ERCC3P19447 782 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 CCND2P30279 289 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 KIAA0895Q8NCT3 520 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 RIT2Q99578 217 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 XPO4Q9C0E2 1151 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 TRPM7Q96QT4 1865 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 TRIM49BA6NDI0 452 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 SLC26A4O43511 780 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 IDEP14735 1019 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 ZNF18P17022 549 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 CYP11B2P19099 503 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 PMS1P54277 932 aaKnown RBP12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 TPM4P67936 248 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 FANCCQ00597 558 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 ARSHQ5FYA8 562 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 UNC13DQ70J99 1090 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 TPH2Q8IWU9 490 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 ADSSL1Q8N142 457 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 PIGOQ8TEQ8 1089 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 NELFBQ8WX92 580 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 NRBP1Q9UHY1 535 aa12.21□□□□□ -0.45
PDXDC1-216ENST00000569715 LRRC37A2A6NM11 1700 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 C2orf69Q8N8R5 385 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 BANK1Q8NDB2 785 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 GLIS3Q8NEA6 775 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 BRI3BPQ8WY22 251 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 BCAS3Q9H6U6 928 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 SLC39A2Q9NP94 309 aa12.21□□□□□ -0.46
PDXDC1-216ENST00000569715 WDR81Q562E7 1941 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 ITGBL1O95965 494 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 OSBPP22059 807 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 FKBP1BP68106 108 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 PAK1Q13153 545 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 MRFAP1L1Q96HT8 127 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 INPP4AQ96PE3 977 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 CCL15Q16663 113 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 PTPN21Q16825 1174 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 CNNM4Q6P4Q7 775 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 ZNF830Q96NB3 372 aaPredicted RBP12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 BHMT2Q9H2M3 363 aa12.2□□□□□ -0.46
PDXDC1-216ENST00000569715 DNM3Q9UQ16 869 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms