RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 PLIN2Q99541 437 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 NUDT12Q9BQG2 462 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 NUP58Q9BVL2 599 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SRRTQ9BXP5 876 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 ANO3Q9BYT9 981 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 PDCL3Q9H2J4 239 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 TAOK3Q9H2K8 898 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 RANBP17Q9H2T7 1088 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SEMA6BQ9H3T3 888 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 SH2D4AQ9H788 454 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 ARHGEF10LQ9HCE6 1279 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 EXOC1Q9NV70 894 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 TRMT1Q9NXH9 659 aaKnown RBP6.01□□□□□ -1.45
SF3B3-213ENST00000569687 PRR12Q9ULL5 1215 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 BCS1LQ9Y276 419 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 PPP2R2CQ9Y2T4 447 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 PSME4Q14997 1843 aa6.01□□□□□ -1.45
SF3B3-213ENST00000569687 PHLPP2Q6ZVD8 1323 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 KDM3AQ9Y4C1 1321 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 SIPA1L1O43166 1804 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ARFGEF1Q9Y6D6 1849 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 FRMD3A2A2Y4 597 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 CARNS1A5YM72 827 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 PHF20L1A8MW92 1017 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 TCP10L2B9ZVM9 353 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 OPLAHO14841 1288 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 MARCH6O60337 910 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 MFAP3LO75121 409 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 GDF11O95390 407 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ASNSP08243 561 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 TPM1P09493 284 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 MUTP22033 750 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 RPA1P27694 616 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 GJA5P36382 358 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 CCT6AP40227 531 aaKnown RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 PMS1P54277 932 aaKnown RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 ADKP55263 362 aaKnown RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 ARHGAP4P98171 946 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 CDK17Q00537 523 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 GHRHRQ02643 423 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 UBXN1Q04323 297 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 LRRC63Q05C16 580 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 SPIRE1Q08AE8 756 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 TNIP1Q15025 636 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ECM1Q16610 540 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 HSP90AA4PQ58FG1 418 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 KIAA1755Q5JYT7 1200 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 CIAPIN1Q6FI81 312 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF662Q6ZS27 426 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ARHGAP27Q6ZUM4 889 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ZNF454Q8N9F8 522 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 KIAA0895Q8NCT3 520 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ACER1Q8TDN7 264 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 SNX29Q8TEQ0 813 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ANKRD7Q92527 254 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ZDHHC16Q969W1 377 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 LENG9Q96B70 501 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 P2RX7Q99572 595 aaKnown RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 POLR3CQ9BUI4 534 aaPredicted RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 EDEM3Q9BZQ6 932 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 FHDC1Q9C0D6 1143 aaPredicted RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 VPS16Q9H269 839 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 VCPKMTQ9H867 229 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 MAGEC2Q9UBF1 373 aaPredicted RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 FEM1BQ9UK73 627 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 PNMA2Q9UL42 364 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 ZBTB21Q9ULJ3 1066 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 CAPN11Q9UMQ6 739 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 USTQ9Y2C2 406 aa6□□□□□ -1.45
SF3B3-213ENST00000569687 MRPL11Q9Y3B7 192 aaKnown RBP6□□□□□ -1.45
SF3B3-213ENST00000569687 PITPNM2Q9BZ72 1349 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 ADAMTSL1Q8N6G6 1762 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 A0A1W2PQJ5 194 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 CLRN2A0PK11 232 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 SPDYE3A6NKU9 549 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 GCOM1H8Y6P7 765 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-213ENST00000569687 WNT10BO00744 389 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 GYPCP04921 128 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 PLA2G4BP0C869 781 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 POLR2MP0CAP2 368 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 FCER1AP12319 257 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 CASP14P31944 242 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 ECE1P42892 770 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 FXR1P51114 621 aaKnown RBP eCLIP5.99□□□□□ -1.45
SF3B3-213ENST00000569687 STAT2P52630 851 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 RASSF7Q02833 373 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 TBC1D8BQ0IIM8 1120 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 TUBB2AQ13885 445 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 CYP26C1Q6V0L0 522 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 KCNK18Q7Z418 384 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 SULF1Q8IWU6 871 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 ZC3H3Q8IXZ2 948 aaKnown RBP5.99□□□□□ -1.45
SF3B3-213ENST00000569687 CSGALNACT2Q8N6G5 542 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 SYT2Q8N9I0 419 aaPredicted RBP5.99□□□□□ -1.45
SF3B3-213ENST00000569687 OR8K1Q8NGG5 319 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 ERMNQ8TAM6 284 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 JDP2Q8WYK2 163 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 ERO1AQ96HE7 468 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 TRIM47Q96LD4 638 aa5.99□□□□□ -1.45
SF3B3-213ENST00000569687 TEPSINQ96N21 525 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms