RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 RRP36Q96EU6 259 aaKnown RBP15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 TMEM87BQ96K49 555 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 GPR20Q99678 358 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 KATNAL1Q9BW62 490 aa15.98■□□□□ 0.15
GTF3C1-211ENST00000569653 ATP9AO75110 1047 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 ACTN1P12814 892 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 IGFBP4P22692 258 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 UBE2SQ16763 222 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 ADCK5Q3MIX3 580 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 CASC1Q6TDU7 716 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 NFXL1Q6ZNB6 911 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 TMTC3Q6ZXV5 915 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 CYFIP1Q7L576 1253 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 CCDC82Q8N4S0 544 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 BRPF3Q9ULD4 1205 aa15.97■□□□□ 0.15
GTF3C1-211ENST00000569653 CNTNAP5Q8WYK1 1306 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 H3BRB1 525 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 BAIAP3O94812 1187 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 SMIM10L2AP0DMW4 78 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 SMIM10L2BP0DMW5 78 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 ITGB5P18084 799 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 KIF5BP33176 963 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 EXOSC10Q01780 885 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 FUT2Q10981 343 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 TRAF1Q13077 416 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 PCNX4Q63HM2 1172 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 METTL7BQ6UX53 244 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 CENPQQ7L2Z9 268 aaPredicted RBP15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 SGMS1Q86VZ5 419 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 CCDC155Q8N6L0 562 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 PHOSPHO2Q8TCD6 241 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 TUT1Q9H6E5 874 aaKnown RBP15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 MLXIPQ9HAP2 919 aa15.96■□□□□ 0.15
GTF3C1-211ENST00000569653 CCDC69A6NI79 296 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 TREHO43280 583 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 FIBPO43427 364 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 LPXNO60711 386 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 ADAM17P78536 824 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 CNKSR3Q6P9H4 555 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 APOA5Q6Q788 366 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 MICU3Q86XE3 530 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 FANCBQ8NB91 859 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 SMARCC2Q8TAQ2 1214 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 LZTS2Q9BRK4 669 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 RNPEPQ9H4A4 650 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 MTCH2Q9Y6C9 303 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 LOXHD1Q8IVV2 1947 aa15.95■□□□□ 0.14
GTF3C1-211ENST00000569653 ATG2AQ2TAZ0 1938 aa15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 NEFLP07196 543 aa15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 KCNA2P16389 499 aa15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 SP4Q02446 784 aa15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 FAM217BQ9NTX9 383 aaPredicted RBP15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 SEC63Q9UGP8 760 aaKnown RBP15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 SLC12A7Q9Y666 1083 aa15.94■□□□□ 0.14
GTF3C1-211ENST00000569653 C17orf102A2RUQ5 167 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 ADAMTS3O15072 1205 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 STAM2O75886 525 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 CPA1P15085 419 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 THPOP40225 353 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 GNAQP50148 359 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 NEDD9Q14511 834 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 GNPTABQ3T906 1256 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 TJAP1Q5JTD0 557 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 UTP14CQ5TAP6 766 aaKnown RBP15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 WWC2Q6AWC2 1192 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 TMTC2Q8N394 836 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 MICALL1Q8N3F8 863 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 DBF4BQ8NFT6 615 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 ARNTL2Q8WYA1 636 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 ATP6V0A1Q93050 837 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 PSTPIP2Q9H939 334 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 SETD4Q9NVD3 440 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 THEGQ9P2T0 379 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 UBIAD1Q9Y5Z9 338 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 NLRC5Q86WI3 1866 aa15.93■□□□□ 0.14
GTF3C1-211ENST00000569653 GSTTP1A0A1W2PQM5 241 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 NOP56O00567 594 aaKnown RBP15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 TLL1O43897 1013 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 LGR5O75473 907 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 GJB5O95377 273 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CTSHP09668 335 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CALM1P0DP23 149 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CALM2P0DP24 149 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CALM3P0DP25 149 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 POU3F3P20264 500 aaPredicted RBP15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 KCNJ6P48051 423 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 TFF2Q03403 129 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 GRB10Q13322 594 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CYP2W1Q8TAV3 490 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 LMBR1Q8WVP7 490 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 CUL5Q93034 780 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 PGBD1Q96JS3 809 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 NEK1Q96PY6 1258 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 SENP7Q9BQF6 1050 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
GTF3C1-211ENST00000569653 ABHD14A-ACY1A0A1B0GW23 586 aa15.91■□□□□ 0.14
GTF3C1-211ENST00000569653 RSPH10B2B2RC85 870 aa15.91■□□□□ 0.14
GTF3C1-211ENST00000569653 RSPH10BP0C881 870 aa15.91■□□□□ 0.14
GTF3C1-211ENST00000569653 CDC27P30260 824 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms