RNA–Protein interactions for RNA: ENST00000568515.1

DENND4A-208, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 2,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-208ENST00000568515 KIAA0753Q2KHM9 967 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 KCNV1Q6PIU1 500 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 CNPY4Q8N129 248 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 CAPN7Q9Y6W3 813 aa23.72■■□□□ 1.39
DENND4A-208ENST00000568515 PPP1R37O75864 691 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 COASYQ13057 564 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 DDB1Q16531 1140 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 NAA35Q5VZE5 725 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 TBC1D9BQ66K14 1250 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 NEDD1Q8NHV4 660 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 WDR66Q8TBY9 1149 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 PAGR1Q9BTK6 254 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.71■■□□□ 1.39
DENND4A-208ENST00000568515 UBA5Q9GZZ9 404 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 IRS2Q9Y4H2 1338 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 A0A087X0T9 212 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 RAD51CO43502 376 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 FAM228BP0C875 321 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 CDK8P49336 464 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 GSTO1P78417 241 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 PTGISQ16647 500 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 USP38Q8NB14 1042 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 DNAJC19Q96DA6 116 aa23.71■■□□□ 1.39
DENND4A-208ENST00000568515 HMGB1P1B2RPK0 211 aaPredicted RBP23.7■■□□□ 1.39
DENND4A-208ENST00000568515 TNNC1P63316 161 aa23.7■■□□□ 1.39
DENND4A-208ENST00000568515 MICALCLQ6ZW33 695 aa23.7■■□□□ 1.39
DENND4A-208ENST00000568515 PRPF38AQ8NAV1 312 aaKnown RBP23.7■■□□□ 1.39
DENND4A-208ENST00000568515 MYBP10242 640 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 HSPA9P38646 679 aaKnown RBP23.7■■□□□ 1.38
DENND4A-208ENST00000568515 FNTAP49354 379 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 RAPGEF1Q13905 1077 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 ZNF473Q8WTR7 871 aaKnown RBP23.7■■□□□ 1.38
DENND4A-208ENST00000568515 CEP63Q96MT8 703 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 PACSIN1Q9BY11 444 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 ADAMTS1Q9UHI8 967 aa23.7■■□□□ 1.38
DENND4A-208ENST00000568515 MDH1P40925 334 aaKnown RBP23.69■■□□□ 1.38
DENND4A-208ENST00000568515 ARID5AQ03989 594 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 GRIK5Q16478 980 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 PLAAQ9Y263 795 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 SNED1Q8TER0 1413 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 FSBPO95073 299 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 USP8P40818 1118 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 KLHL30Q0D2K2 578 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 ECM1Q16610 540 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 KLHL7Q8IXQ5 586 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 PANK4Q9NVE7 773 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 AIPL1Q9NZN9 384 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 TMEM59LQ9UK28 342 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 NAV1Q8NEY1 1877 aa23.69■■□□□ 1.38
DENND4A-208ENST00000568515 ITGB3BPQ13352 177 aaPredicted RBP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 SEPT2Q15019 361 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 FAM26FQ5R3K3 315 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 C16orf86Q6ZW13 317 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 MAATS1Q7Z4T9 603 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 TRIM59Q8IWR1 403 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 MARCH10Q8NA82 808 aaPredicted RBP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 TAF1DQ9H5J8 278 aaPredicted RBP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 RIOX1Q9H6W3 641 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 ROBO1Q9Y6N7 1651 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 USP17L5A8MUK1 530 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 GNA14O95837 355 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 ADCY7P51828 1080 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 CEP85LQ5SZL2 805 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 YTHDF3Q7Z739 585 aaKnown RBP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 FAM133AQ8N9E0 248 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP23.68■■□□□ 1.383e-7■□□□□ 10.3
DENND4A-208ENST00000568515 TAF4BQ92750 862 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 COA7Q96BR5 231 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 CCT8L2Q96SF2 557 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 CDCA7Q9BWT1 371 aaPredicted RBP23.68■■□□□ 1.38
DENND4A-208ENST00000568515 WNK3Q9BYP7 1800 aa23.68■■□□□ 1.38
DENND4A-208ENST00000568515 ENOX2Q16206 610 aaKnown RBP23.67■■□□□ 1.38
DENND4A-208ENST00000568515 NLRP14Q86W24 1093 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 CEP95Q96GE4 821 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 ISCUQ9H1K1 167 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 hCG_1984214I3L0E3 225 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 MNAT1P51948 309 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 SEC24CP53992 1094 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 ASIC2Q16515 512 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 ZNF713Q8N859 430 aaPredicted RBP23.67■■□□□ 1.38
DENND4A-208ENST00000568515 MYCBPAPQ8TBZ2 947 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 NYXQ9GZU5 481 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 TMBIM4Q9HC24 238 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 PLCB1Q9NQ66 1216 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 CES2O00748 559 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 LDHCP07864 332 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 MARSP56192 900 aaKnown RBP23.67■■□□□ 1.38
DENND4A-208ENST00000568515 RPS6KA1Q15418 735 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 EIF1ADQ8N9N8 165 aaKnown RBP23.67■■□□□ 1.38
DENND4A-208ENST00000568515 FGFBP2Q9BYJ0 223 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 TBC1D7Q9P0N9 293 aa23.67■■□□□ 1.38
DENND4A-208ENST00000568515 CCDC24Q8N4L8 307 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 H0YHG0 523 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 MYO1FO00160 1098 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 KCNK3O14649 394 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 ERVK-9P63128 1117 aa23.66■■□□□ 1.38
DENND4A-208ENST00000568515 HLTFQ14527 1009 aaKnown RBP eCLIP23.66■■□□□ 1.38
DENND4A-208ENST00000568515 PPP4R3AQ6IN85 833 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms