RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 OTOP1Q7RTM1 612 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 GPBP1Q86WP2 473 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 ADSSL1Q8N142 457 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 GIMAP8Q8ND71 665 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 ZC3H15Q8WU90 426 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 EIF2AK1Q9BQI3 630 aaKnown RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 TEX13BQ9BXU2 312 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 KCNH7Q9NS40 1196 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 VAV3Q9UKW4 847 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 PNMA2Q9UL42 364 aa7.89□□□□□ -1.15
SMG1-215ENST00000568239 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
SMG1-215ENST00000568239 PHIPQ8WWQ0 1821 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 POTEJP0CG39 1038 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 ZNF18P17022 549 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 PMS1P54277 932 aaKnown RBP7.88□□□□□ -1.15
SMG1-215ENST00000568239 IRX3P78415 501 aaPredicted RBP7.88□□□□□ -1.15
SMG1-215ENST00000568239 MTMR1Q13613 665 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 UNC13DQ70J99 1090 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 ARMC9Q7Z3E5 817 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 TEX2Q8IWB9 1127 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 PIGOQ8TEQ8 1089 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 CACTINQ8WUQ7 758 aaKnown RBP7.88□□□□□ -1.15
SMG1-215ENST00000568239 PAGR1Q9BTK6 254 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 TEKT3Q9BXF9 490 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 BHMT2Q9H2M3 363 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 POLD4Q9HCU8 107 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 RABGAP1Q9Y3P9 1069 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 PSMD10O75832 226 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 SPATA31C1P0DKV0 1188 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 PGM5Q15124 567 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 LRRC41Q15345 812 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 ANKRD20A12PQ8NF67 263 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 DYDC2Q96IM9 177 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 SRRTQ9BXP5 876 aaKnown RBP7.88□□□□□ -1.15
SMG1-215ENST00000568239 PANK4Q9NVE7 773 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
SMG1-215ENST00000568239 PVALEFA0A1B0GWK0 134 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 TRAF5O00463 557 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 MRPS9P82933 396 aaKnown RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 PPATQ06203 517 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 TKFCQ3LXA3 575 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 FILIP1LQ4L180 1135 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 HERC4Q5GLZ8 1057 aaPredicted RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 HYIQ5T013 277 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 PNMA8AQ86V59 439 aaPredicted RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 LRRC8AQ8IWT6 810 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 ANKRD35Q8N283 1001 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 KIAA0895Q8NCT3 520 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 REPS2Q8NFH8 660 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 SLC5A5Q92911 643 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 OPTNQ96CV9 577 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 PDCD2LQ9BRP1 358 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 VPS16Q9H269 839 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 UNC45AQ9H3U1 944 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 ACAD9Q9H845 621 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 PXMP2Q9NR77 195 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 PYCARDQ9ULZ3 195 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 ZBTB39O15060 712 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 SFPQP23246 707 aaKnown RBP eCLIP7.87□□□□□ -1.15
SMG1-215ENST00000568239 CLCN1P35523 988 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 MKRN3Q13064 507 aaKnown RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 DNTTIP2Q5QJE6 756 aaKnown RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 PCNX4Q63HM2 1172 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 CCDC65Q8IXS2 484 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 CSGALNACT2Q8N6G5 542 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 MAP3K20Q9NYL2 800 aaKnown RBP7.87□□□□□ -1.15
SMG1-215ENST00000568239 STK24Q9Y6E0 443 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 PARP14Q460N5 1801 aa7.87□□□□□ -1.15
SMG1-215ENST00000568239 RPTORQ8N122 1335 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 KCNJ18B7U540 433 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 N4BP3O15049 544 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 SLITRK3O94933 977 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 NR3C2P08235 984 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 CYP11B2P19099 503 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 OAZ1P54368 228 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 GSDMDP57764 484 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 GOLGA8FQ08AF8 430 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 GOLGA8DPQ0D2H9 430 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 COASYQ13057 564 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 PPP2R5CQ13362 524 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 KCNJ12Q14500 433 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 WDR78Q5VTH9 848 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 ANKRD40Q6AI12 368 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 MIER3Q7Z3K6 550 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 NCAPG2Q86XI2 1143 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 GLIS3Q8NEA6 775 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 P2RX5Q93086 422 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 DNAJC19Q96DA6 116 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 DHTKD1Q96HY7 919 aaPredicted RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 CTAGE1Q96RT6 745 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 A1CFQ9NQ94 594 aaKnown RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 JADE2Q9NQC1 790 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 INTS13Q9NVM9 706 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 TAB2Q9NYJ8 693 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 IMPACTQ9P2X3 320 aa7.86□□□□□ -1.15
SMG1-215ENST00000568239 MAGEC2Q9UBF1 373 aaPredicted RBP7.86□□□□□ -1.15
SMG1-215ENST00000568239 ADAMTS5Q9UNA0 930 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms