RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 SCRN1Q12765 414 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 ANKRD1Q15327 319 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 NPY5RQ15761 445 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 CEP55Q53EZ4 464 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 PHKBQ93100 1093 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 ANO3Q9BYT9 981 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 HIPK3Q9H422 1215 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 EHMT1Q9H9B1 1298 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 NCOA5Q9HCD5 579 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 TRMT13Q9NUP7 481 aaKnown RBP9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 TPCN1Q9ULQ1 816 aa9.37□□□□□ -0.91
HDGFL3-205ENST00000568129 STK36Q9NRP7 1315 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 IGLV3-22A0A075B6J6 115 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 GSTTP1A0A1W2PQM5 241 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 H3BRB1 525 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 ATG7O95352 703 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 SSRP1Q08945 709 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 PPIGQ13427 754 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 HIC1Q14526 733 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 MFSD10Q14728 455 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 GPNMBQ14956 572 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 TRIM71Q2Q1W2 868 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 TMEM240Q5SV17 173 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 C9orf50Q5SZB4 431 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 GALNT17Q6IS24 598 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 GDF6Q6KF10 455 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 CYFIP1Q7L576 1253 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 TMEM199Q8N511 208 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 DAGLBQ8NCG7 672 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP2W1Q8TAV3 490 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 BICD2Q8TD16 824 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 KIF2CQ99661 725 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 WNT8AQ9H1J5 351 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 TUT1Q9H6E5 874 aaKnown RBP9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 MLXIPQ9HAP2 919 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 C6orf50Q9HD87 102 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 IL23AQ9NPF7 189 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 KCNH7Q9NS40 1196 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 HDAC6Q9UBN7 1215 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 MICAL3Q7RTP6 2002 aa9.36□□□□□ -0.91
HDGFL3-205ENST00000568129 UMODL1Q5DID0 1318 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 IGKV6D-21A0A0A0MT36 114 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 FAM86B1E9PN63 330 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 DHX15O43143 795 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 LGR5O75473 907 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 DEXIO95424 95 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CTDNEP1O95476 244 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 LGALS2P05162 132 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 FAM86B2P0C5J1 330 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 IQCF3P0C7M6 154 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 ARP10275 920 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CSF2RAP15509 400 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP2C18P33260 490 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 RFC2P35250 354 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 USP11P51784 963 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 AK2P54819 239 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 SMAD3P84022 425 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 ARHGAP4P98171 946 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 AKAP17AQ02040 695 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 MTMR1Q13613 665 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 KIAA0753Q2KHM9 967 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 TRAF7Q6Q0C0 670 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 RPAINQ86UA6 219 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 TRIM22Q8IYM9 498 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CCDC148Q8NFR7 591 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CAGE1Q8TC20 777 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 SEPT1Q8WYJ6 367 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 HERVK_113Q902F9 699 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 DHX38Q92620 1227 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 SLC26A6Q9BXS9 759 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 AGO4Q9HCK5 861 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 TMEM260Q9NX78 707 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 NAP1L2Q9ULW6 460 aaPredicted RBP9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 TELO2Q9Y4R8 837 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 SIP14410 1827 aa9.35□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP3A7-CYP3A51PA0A087WV96 503 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PARNO95453 639 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PFKMP08237 780 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 ZNF286BP0CG31 522 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP2C9P11712 490 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 CYP3A7P24462 503 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PTK7Q13308 1070 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PTGISQ16647 500 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 ME3Q16798 604 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PSRC1Q6PGN9 363 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 CPLX2Q6PUV4 134 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 RPUSD2Q8IZ73 545 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 REXO1Q8N1G1 1221 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 LENG9Q96B70 501 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 MBOAT7Q96N66 472 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PCYT2Q99447 389 aa9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
HDGFL3-205ENST00000568129 PHF20Q9BVI0 1012 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms