RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 LRRC41Q15345 812 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 CYFIP1Q7L576 1253 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 HAS1Q92839 578 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 SLC5A5Q92911 643 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 GJA10Q969M2 543 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 NOL7Q9UMY1 257 aaKnown RBP20.4■□□□□ 0.86
COMMD4-222ENST00000568034 PCDHB6Q9Y5E3 794 aa20.4■□□□□ 0.86
COMMD4-222ENST00000568034 IPO5O00410 1097 aaKnown RBP20.39■□□□□ 0.85
COMMD4-222ENST00000568034 BRD1O95696 1058 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 PDIA4P13667 645 aaKnown RBP20.39■□□□□ 0.85
COMMD4-222ENST00000568034 BEX3Q00994 111 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 ZNF174Q15697 407 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 HSDL1Q3SXM5 330 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 RILPL1Q5EBL4 403 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 FAM173BQ6P4H8 233 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 DHX37Q8IY37 1157 aaKnown RBP20.39■□□□□ 0.85
COMMD4-222ENST00000568034 AFG1LQ8WV93 481 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 ZNF577Q9BSK1 485 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 AP5M1Q9H0R1 490 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 TMEM60Q9H2L4 133 aa20.39■□□□□ 0.85
COMMD4-222ENST00000568034 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.39■□□□□ 0.85
COMMD4-222ENST00000568034 A6NJR5 290 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 CCDC85CA6NKD9 419 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 F13A1P00488 732 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 MMP3P08254 477 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 C6orf222P0C671 652 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 HOXD8P13378 290 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 MCM7P33993 719 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 ORC2Q13416 577 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 LAMC2Q13753 1193 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 FSCN1Q16658 493 aaKnown RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 FOXD4L5Q5VV16 416 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 PPTC7Q8NI37 304 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 FOXD4L4Q8WXT5 416 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-222ENST00000568034 MTMR9Q96QG7 549 aa20.38■□□□□ 0.85
COMMD4-222ENST00000568034 TBX3O15119 743 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 NEMFO60524 1076 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 PSMD10O75832 226 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 CCNE2O96020 404 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 EN2P19622 333 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-222ENST00000568034 B3GNT9Q6UX72 402 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 C4orf32Q8N8J7 132 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 GIMAP8Q8ND71 665 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-222ENST00000568034 SPATA33Q96N06 139 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 GPR20Q99678 358 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 ZSCAN16Q9H4T2 348 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-222ENST00000568034 MLXIPQ9HAP2 919 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 JPH1Q9HDC5 661 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-222ENST00000568034 MYH15Q9Y2K3 1946 aa20.37■□□□□ 0.85
COMMD4-222ENST00000568034 DDX39AO00148 427 aaKnown RBP20.36■□□□□ 0.85
COMMD4-222ENST00000568034 DNM1LO00429 736 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 TFRCP02786 760 aaKnown RBP20.36■□□□□ 0.85
COMMD4-222ENST00000568034 SOX10P56693 466 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 RNF180Q86T96 592 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 ARRDC4Q8NCT1 418 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 RIT2Q99578 217 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 SDF4Q9BRK5 362 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 SPC25Q9HBM1 224 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 TBC1D22BQ9NU19 505 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 SLC9A2Q9UBY0 812 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 VAV3Q9UKW4 847 aa20.36■□□□□ 0.85
COMMD4-222ENST00000568034 CPT1AP50416 773 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 SP4Q02446 784 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 KCNA10Q16322 511 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 CALCRLQ16602 461 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 GNASQ5JWF2 1037 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 LRCH2Q5VUJ6 765 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 UBE2Q1Q7Z7E8 422 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 ANKLE1Q8NAG6 615 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 DIS3LQ8TF46 1054 aaKnown RBP20.35■□□□□ 0.85
COMMD4-222ENST00000568034 FAM20AQ96MK3 541 aa20.35■□□□□ 0.85
COMMD4-222ENST00000568034 FTOQ9C0B1 505 aaKnown RBP eCLIP20.35■□□□□ 0.85
COMMD4-222ENST00000568034 GSTTP1A0A1W2PQM5 241 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 CAPN2P17655 700 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 ACTR2P61160 394 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 TSEN34Q9BSV6 310 aaKnown RBP20.34■□□□□ 0.85
COMMD4-222ENST00000568034 TEKT3Q9BXF9 490 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 UNC45AQ9H3U1 944 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 PHF24Q9UPV7 400 aa20.34■□□□□ 0.85
COMMD4-222ENST00000568034 ELP1O95163 1332 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 MOXD2PA6NHM9 499 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 GAS7O60861 476 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 MYCNP04198 464 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-222ENST00000568034 ASGR1P07306 291 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 OR52Z1P0C646 297 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 COL6A1P12109 1028 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 PURAQ00577 322 aaKnown RBP20.33■□□□□ 0.85
COMMD4-222ENST00000568034 SPIRE1Q08AE8 756 aa20.33■□□□□ 0.85
COMMD4-222ENST00000568034 ZNF746Q6NUN9 644 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-222ENST00000568034 SCN10AQ9Y5Y9 1956 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 ATG7O95352 703 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 ACLYP53396 1101 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 ATP2C1P98194 919 aaPredicted RBP20.32■□□□□ 0.84
COMMD4-222ENST00000568034 KRT76Q01546 638 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 PTGDRQ13258 359 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 CXCL17Q6UXB2 119 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 SLFN12Q8IYM2 578 aa20.32■□□□□ 0.84
COMMD4-222ENST00000568034 PCSK9Q8NBP7 692 aaKnown RBP20.32■□□□□ 0.84
COMMD4-222ENST00000568034 SEPT1Q8WYJ6 367 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms