RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 ANKRD40Q6AI12 368 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 DPY19L2Q6NUT2 758 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 TBC1D5Q92609 795 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 SLC39A2Q9NP94 309 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 TRMT1Q9NXH9 659 aaKnown RBP25.86■■□□□ 1.73
LINC00543-201ENST00000567234 ZNF112Q9UJU3 913 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 VAV3Q9UKW4 847 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 POTEB3A0JP26 581 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 POTECB2RU33 542 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 MED24O75448 989 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 USP14P54578 494 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 ADKP55263 362 aaKnown RBP25.86■■□□□ 1.73
LINC00543-201ENST00000567234 GHRHRQ02643 423 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 POTEBQ6S5H4 581 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 CNGA4Q8IV77 575 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 SAMD3Q8N6K7 520 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 PPP1R13BQ96KQ4 1090 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 PITPNM2Q9BZ72 1349 aa25.86■■□□□ 1.73
LINC00543-201ENST00000567234 A0A1W2PQC6 194 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 LGALS16A8MUM7 142 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 IDEP14735 1019 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 STAT3P40763 770 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 HSD17B4P51659 736 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 MUM1L1Q5H9M0 696 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 PRAMEF18Q5VWM3 479 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 CATSPER3Q86XQ3 398 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 POLR3CQ9BUI4 534 aaPredicted RBP25.85■■□□□ 1.73
LINC00543-201ENST00000567234 WDR18Q9BV38 432 aa25.85■■□□□ 1.73
LINC00543-201ENST00000567234 ADARB2Q9NS39 739 aaKnown RBP25.85■■□□□ 1.73
LINC00543-201ENST00000567234 E9PMD0 336 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 FGFR1OPO95684 399 aaKnown RBP25.84■■□□□ 1.73
LINC00543-201ENST00000567234 FDX1P10109 184 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 LRRC63Q05C16 580 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 RBL2Q08999 1139 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 GOLGA8FQ08AF8 430 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 GOLGA8DPQ0D2H9 430 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 NBPF12Q5TAG4 269 aaPredicted RBP25.84■■□□□ 1.73
LINC00543-201ENST00000567234 NCAPH2Q6IBW4 605 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 CCDC65Q8IXS2 484 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 MAP3K20Q9NYL2 800 aaKnown RBP25.84■■□□□ 1.73
LINC00543-201ENST00000567234 CCPG1Q9ULG6 757 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 V9GYY5 206 aaPredicted RBP25.84■■□□□ 1.73
LINC00543-201ENST00000567234 ZNF536O15090 1300 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 GLTPD2A6NH11 291 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 ZSCAN12O43309 604 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 SEMA6BQ9H3T3 888 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 PANK4Q9NVE7 773 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 DNM3Q9UQ16 869 aa25.84■■□□□ 1.73
LINC00543-201ENST00000567234 MFAP3LO75121 409 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 SPATA31C1P0DKV0 1188 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 SLC12A3P55017 1021 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 COASYQ13057 564 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 ELF2Q15723 593 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 MCF2L2Q86YR7 1114 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 TXLNBQ8N3L3 684 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 ZNF592Q92610 1267 aa25.83■■□□□ 1.73
LINC00543-201ENST00000567234 L3MBTL3Q96JM7 780 aaPredicted RBP25.83■■□□□ 1.73
LINC00543-201ENST00000567234 PARP14Q460N5 1801 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 CYP11B2P19099 503 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 FECHP22830 423 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 DNM2P50570 870 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 SETQ01105 290 aaPredicted RBP25.82■■□□□ 1.72
LINC00543-201ENST00000567234 UBXN1Q04323 297 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 CEP55Q53EZ4 464 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 GPBP1Q86WP2 473 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 SCYL3Q8IZE3 742 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 MB21D1Q8N884 522 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 CYP2W1Q8TAV3 490 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 ZNF507Q8TCN5 953 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 SLC5A5Q92911 643 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 HPS3Q969F9 1004 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 AS3MTQ9HBK9 375 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 SLC38A10Q9HBR0 1119 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 PPP2R3BQ9Y5P8 575 aa25.82■■□□□ 1.72
LINC00543-201ENST00000567234 RBBP6Q7Z6E9 1792 aaKnown RBP25.82■■□□□ 1.72
LINC00543-201ENST00000567234 GYPCP04921 128 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 PDE4CQ08493 712 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 PPP2R5CQ13362 524 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 DLK2Q6UY11 383 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 SYT2Q8N9I0 419 aaPredicted RBP25.81■■□□□ 1.72
LINC00543-201ENST00000567234 TUBGCP2Q9BSJ2 902 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 PHLPP2Q6ZVD8 1323 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 ZC3H4Q9UPT8 1303 aaKnown RBP25.81■■□□□ 1.72
LINC00543-201ENST00000567234 FRMD3A2A2Y4 597 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 GOLGA6L9A6NEM1 432 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 PSMD10O75832 226 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 SSBP05455 408 aaKnown RBP eCLIP25.81■■□□□ 1.72
LINC00543-201ENST00000567234 MUTP22033 750 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 NAA30Q147X3 362 aaPredicted RBP25.81■■□□□ 1.72
LINC00543-201ENST00000567234 FAM26FQ5R3K3 315 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 AGBL1Q96MI9 1066 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 UIMC1Q96RL1 719 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 PPP1R9AQ9ULJ8 1098 aa25.81■■□□□ 1.72
LINC00543-201ENST00000567234 POTEFA5A3E0 1075 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 MEIS1O00470 390 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 POTEIP0CG38 1075 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 POTEGQ6S5H5 508 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 POTEEQ6S8J3 1075 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 OTOP1Q7RTM1 612 aa25.8■■□□□ 1.72
LINC00543-201ENST00000567234 MYOCDQ8IZQ8 938 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms