RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 ANTXR1Q9H6X2 564 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 MKNK2Q9HBH9 465 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 NOB1Q9ULX3 412 aaKnown RBP11.49□□□□□ -0.57
CAPN3-216ENST00000567071 TNNQ9UQP3 1299 aa11.49□□□□□ -0.57
CAPN3-216ENST00000567071 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 CYP2D7A0A087X1C5 515 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 C2CD4DB7Z1M9 353 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 CAND2O75155 1236 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 DNAJB1P25685 340 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 KIAA0753Q2KHM9 967 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 TPRNQ4KMQ1 711 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 PPM1JQ5JR12 505 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 VARS2Q5ST30 1063 aaKnown RBP11.48□□□□□ -0.57
CAPN3-216ENST00000567071 SLFN13Q68D06 897 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 ANKRD54Q6NXT1 300 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 CHST3Q7LGC8 479 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 PLCD3Q8N3E9 789 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 GMCL1P1Q8NEA9 526 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 WNT8BQ93098 351 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 BORCS6Q96GS4 357 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 SMOC2Q9H3U7 446 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 ARMT1Q9H993 441 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 ZNF532Q9HCE3 1301 aa11.48□□□□□ -0.57
CAPN3-216ENST00000567071 PER2O15055 1255 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 ASGR2P07307 311 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 DUSP6Q16828 381 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 ZKSCAN2Q63HK3 967 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 SERINC5Q86VE9 423 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 KLHL23Q8NBE8 558 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 STAG1Q8WVM7 1258 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.47□□□□□ -0.57
CAPN3-216ENST00000567071 APOL5Q9BWW9 433 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 API5Q9BZZ5 524 aaKnown RBP11.47□□□□□ -0.57
CAPN3-216ENST00000567071 S1PR5Q9H228 398 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 DBNLQ9UJU6 430 aaKnown RBP11.47□□□□□ -0.57
CAPN3-216ENST00000567071 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
CAPN3-216ENST00000567071 TTLL1O95922 423 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 F2P00734 622 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 CTSHP09668 335 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 TRIM27P14373 513 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 CALML3P27482 149 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 SLC1A4P43007 532 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 ZNF200P98182 395 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-216ENST00000567071 UBE3AQ05086 875 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 PDE12Q6L8Q7 609 aaKnown RBP11.46□□□□□ -0.57
CAPN3-216ENST00000567071 ZDHHC14Q8IZN3 488 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 SIX5Q8N196 739 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 PANK1Q8TE04 598 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 MKL1Q969V6 931 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 CCDC8Q9H0W5 538 aaPredicted RBP11.46□□□□□ -0.57
CAPN3-216ENST00000567071 LIMD1Q9UGP4 676 aa11.46□□□□□ -0.57
CAPN3-216ENST00000567071 CNOT1A5YKK6 2376 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 KIAA1671Q9BY89 1806 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 PRKAB2O43741 272 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 MBD4O95243 580 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 GNAI2P04899 355 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 SP9P0CG40 484 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 RLBP1P12271 317 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 NPR3P17342 541 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 MTHFRP42898 656 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 RBM10P98175 930 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ITIH3Q06033 890 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 TBC1D8BQ0IIM8 1120 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 TMEM184AQ6ZMB5 413 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 RUFY4Q6ZNE9 571 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 FTSJ3Q8IY81 847 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 SUMF1Q8NBK3 374 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 DNERQ8NFT8 737 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ZNF689Q96CS4 500 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 RC3H2Q9HBD1 1191 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ZNF287Q9HBT7 754 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ERVK-5Q9HDB9 667 aa11.45□□□□□ -0.58
CAPN3-216ENST00000567071 ARPP21Q9UBL0 812 aaPredicted RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 MRPL42Q9Y6G3 142 aaKnown RBP11.45□□□□□ -0.58
CAPN3-216ENST00000567071 TTC3P53804 2025 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 PNMA6EA0A0J9YXQ4 647 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 HAS3O00219 553 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 SPTLC1O15269 473 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 PLA2G6O60733 806 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 PPFIA3O75145 1194 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 ARIH2O95376 493 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 ICAM1P05362 532 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 ZNF286BP0CG31 522 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 RASA1P20936 1047 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 EDNRBP24530 442 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 ARHGAP1Q07960 439 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 LLGL2Q6P1M3 1020 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 VN1R2Q8NFZ6 395 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 POMKQ9H5K3 350 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 TLR7Q9NYK1 1049 aaKnown RBP11.44□□□□□ -0.58
CAPN3-216ENST00000567071 PCDHB12Q9Y5F1 795 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 PLXNA4Q9HCM2 1894 aa11.44□□□□□ -0.58
CAPN3-216ENST00000567071 ASH1LQ9NR48 2969 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms