RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 TMEM39BQ9GZU3 492 aa20.75■□□□□ 0.91
MSLN-207ENST00000566549 HDAC6Q9UBN7 1215 aa20.75■□□□□ 0.91
MSLN-207ENST00000566549 DUSP10Q9Y6W6 482 aa20.75■□□□□ 0.91
MSLN-207ENST00000566549 ARFGEF1Q9Y6D6 1849 aa20.75■□□□□ 0.91
MSLN-207ENST00000566549 ZNF646O15015 1829 aaPredicted RBP20.74■□□□□ 0.91
MSLN-207ENST00000566549 MSH4O15457 936 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 IPO7O95373 1038 aaKnown RBP20.74■□□□□ 0.91
MSLN-207ENST00000566549 CCDC84Q86UT8 332 aaPredicted RBP20.74■□□□□ 0.91
MSLN-207ENST00000566549 KRT222Q8N1A0 295 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 JAKMIP2Q96AA8 810 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 HAUS4Q9H6D7 363 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 ARHGEF10LQ9HCE6 1279 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 PCDHA2Q9Y5H9 948 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 FHOD1Q9Y613 1164 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 SLC12A3P55017 1021 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 KRT83P78385 493 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 FKBP3Q00688 224 aaKnown RBP20.74■□□□□ 0.91
MSLN-207ENST00000566549 ZCWPW2Q504Y3 356 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 OGFOD1Q8N543 542 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 TTLL6Q8N841 843 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 CCDC42Q96M95 316 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 ST7Q9NRC1 585 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 MYO1AQ9UBC5 1043 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 HERC5Q9UII4 1024 aaKnown RBP20.74■□□□□ 0.91
MSLN-207ENST00000566549 COL4A3BPQ9Y5P4 624 aa20.74■□□□□ 0.91
MSLN-207ENST00000566549 Q4G0T1 1027 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 MOXD1Q6UVY6 613 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 RRAGAQ7L523 313 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 SMAP1Q8IYB5 467 aaPredicted RBP20.73■□□□□ 0.91
MSLN-207ENST00000566549 ERMNQ8TAM6 284 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 SCFD1Q8WVM8 642 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 RABGGTAQ92696 567 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 A0A1W2PQJ5 194 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 LRRC53A6NM62 1247 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 FOSP01100 380 aaPredicted RBP20.73■□□□□ 0.91
MSLN-207ENST00000566549 SPATA31C1P0DKV0 1188 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 FIGNQ5HY92 759 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 BTNL9Q6UXG8 535 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 CEP112Q8N8E3 955 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 CAMKK2Q96RR4 588 aa20.73■□□□□ 0.91
MSLN-207ENST00000566549 MACROD2A1Z1Q3 448 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 PNMA6AP0CW24 399 aaPredicted RBP20.72■□□□□ 0.91
MSLN-207ENST00000566549 CASP5P51878 434 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 BMS1Q14692 1282 aaKnown RBP20.72■□□□□ 0.91
MSLN-207ENST00000566549 BCAS3Q9H6U6 928 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 EMILIN3Q9NT22 766 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 ZBTB21Q9ULJ3 1066 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 ZNF263O14978 683 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 CHMP2AO43633 222 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 FAM151AQ8WW52 585 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 CRACR2AQ9BSW2 395 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 RGL1Q9NZL6 768 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 ARHGAP20Q9P2F6 1191 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 HDAC9Q9UKV0 1011 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 MYO6Q9UM54 1294 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 DNM3Q9UQ16 869 aa20.72■□□□□ 0.91
MSLN-207ENST00000566549 EIF3CLB5ME19 914 aaKnown RBP20.71■□□□□ 0.91
MSLN-207ENST00000566549 KRT86O43790 486 aa20.71■□□□□ 0.91
MSLN-207ENST00000566549 ATP1A1P05023 1023 aaKnown RBP20.71■□□□□ 0.91
MSLN-207ENST00000566549 APBA1Q02410 837 aa20.71■□□□□ 0.91
MSLN-207ENST00000566549 CCDC170Q8IYT3 715 aa20.71■□□□□ 0.91
MSLN-207ENST00000566549 EIF3CQ99613 913 aaKnown RBP20.71■□□□□ 0.91
MSLN-207ENST00000566549 GLIS2Q9BZE0 524 aaPredicted RBP20.71■□□□□ 0.91
MSLN-207ENST00000566549 NLRC4Q9NPP4 1024 aa20.71■□□□□ 0.91
MSLN-207ENST00000566549 CNTNAP1P78357 1384 aa20.71■□□□□ 0.91
MSLN-207ENST00000566549 EML1O00423 815 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 SRGAP2O75044 1071 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 ZRANB2O95218 330 aaKnown RBP eCLIP20.7■□□□□ 0.91
MSLN-207ENST00000566549 MMP14P50281 582 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 REEP2Q9BRK0 252 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 BHMT2Q9H2M3 363 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 DEF6Q9H4E7 631 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 PLAGL2Q9UPG8 496 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 TMX2Q9Y320 296 aa20.7■□□□□ 0.91
MSLN-207ENST00000566549 TNS1Q9HBL0 1735 aaKnown RBP20.7■□□□□ 0.9
MSLN-207ENST00000566549 RHOXF2BP0C7M4 288 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 RPA1P27694 616 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 AMPD2Q01433 879 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 GIT2Q14161 759 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 CC2D1AQ6P1N0 951 aaPredicted RBP20.7■□□□□ 0.9
MSLN-207ENST00000566549 CACNA2D4Q7Z3S7 1137 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 NEK11Q8NG66 645 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 RHOXF2Q9BQY4 288 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 GOPCQ9HD26 462 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 VAV3Q9UKW4 847 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 ABCB11O95342 1321 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 COL4A5P29400 1685 aa20.7■□□□□ 0.9
MSLN-207ENST00000566549 RSPH10B2B2RC85 870 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 TBX3O15119 743 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 VIL1P09327 827 aaKnown RBP20.69■□□□□ 0.9
MSLN-207ENST00000566549 RSPH10BP0C881 870 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 DPEP1P16444 411 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 KCNMA1Q12791 1236 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 SFR1Q86XK3 245 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 GMLQ99445 158 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 WDR18Q9BV38 432 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 KCTD10Q9H3F6 313 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 ANKZF1Q9H8Y5 726 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 FBXO28Q9NVF7 368 aa20.69■□□□□ 0.9
MSLN-207ENST00000566549 EIF4A3P38919 411 aaKnown RBP20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms