RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 KIAA0754O94854 1291 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 PLEKP08567 350 aaPredicted RBP12.1□□□□□ -0.47
TCF4-232ENST00000566286 MATR3P43243 847 aaKnown RBP eCLIP12.1□□□□□ -0.475e-7■■■■■ 29.7
TCF4-232ENST00000566286 MAGEA1P43355 309 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 GYG1P46976 350 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 PAK2Q13177 524 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 MAN2A1Q16706 1144 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 INF2Q27J81 1249 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 CENPPQ6IPU0 288 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 MICALCLQ6ZW33 695 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
TCF4-232ENST00000566286 LINC00116Q8NCU8 138 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 PLIN2Q99541 437 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 NCAPGQ9BPX3 1015 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 NDST4Q9H3R1 872 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 DCP1AQ9NPI6 582 aaPredicted RBP12.1□□□□□ -0.47
TCF4-232ENST00000566286 USP21Q9UK80 565 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 KIAA1551Q9HCM1 1747 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 SSU72P8A0A1W2PR75 194 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 CFAP58Q5T655 872 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 KDM7AQ6ZMT4 941 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 CCDC91Q7Z6B0 441 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 MREGQ8N565 214 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
TCF4-232ENST00000566286 ARL8AQ96BM9 186 aa12.1□□□□□ -0.47
TCF4-232ENST00000566286 LUC7LQ9NQ29 371 aaKnown RBP12.1□□□□□ -0.47
TCF4-232ENST00000566286 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
TCF4-232ENST00000566286 GRM4Q14833 912 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 EMC10Q5UCC4 262 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 CNPY4Q8N129 248 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 PNMA1Q8ND90 353 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 LRRC15Q8TF66 581 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 KAT2BQ92831 832 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 EEF2KMTQ96G04 330 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 ZIM3Q96PE6 472 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 PAGR1Q9BTK6 254 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 EHD4Q9H223 541 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 GDF3Q9NR23 364 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 FAM207AQ9NSI2 230 aaPredicted RBP12.09□□□□□ -0.47
TCF4-232ENST00000566286 BARHL2Q9NY43 387 aa12.09□□□□□ -0.47
TCF4-232ENST00000566286 NTSR2O95665 410 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 FCER1AP12319 257 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 ATP2B4P23634 1241 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 SETQ01105 290 aaPredicted RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 TXNRD1Q16881 649 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 LDLRAD1Q5T700 205 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 YTHDF3Q7Z739 585 aaKnown RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 CD302Q8IX05 232 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 EPS8L1Q8TE68 723 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 ZNF384Q8TF68 577 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 ANKS1AQ92625 1134 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 NSUN4Q96CB9 384 aaKnown RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 CALML4Q96GE6 196 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 HINFPQ9BQA5 517 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 TLR10Q9BXR5 811 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 NUCKS1Q9H1E3 243 aaKnown RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 MMRN2Q9H8L6 949 aa12.08□□□□□ -0.47
TCF4-232ENST00000566286 RBM12Q9NTZ6 932 aaKnown RBP12.08□□□□□ -0.47
TCF4-232ENST00000566286 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 LRRC53A6NM62 1247 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
TCF4-232ENST00000566286 HNRNPH1P31943 449 aaKnown RBP12.08□□□□□ -0.48
TCF4-232ENST00000566286 CXCR5P32302 372 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 LRRC63Q05C16 580 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 PDCLQ13371 301 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 ORC2Q13416 577 aaPredicted RBP12.08□□□□□ -0.48
TCF4-232ENST00000566286 TCEAL1Q15170 157 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 RRAGAQ7L523 313 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 KRT25Q7Z3Z0 450 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 REM2Q8IYK8 340 aaPredicted RBP12.08□□□□□ -0.48
TCF4-232ENST00000566286 IQCKQ8N0W5 287 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 OTUD6BQ8N6M0 293 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 PRPF38AQ8NAV1 312 aaKnown RBP12.08□□□□□ -0.48
TCF4-232ENST00000566286 KIAA0895Q8NCT3 520 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCF4-232ENST00000566286 AKT1S1Q96B36 256 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 SEMA6BQ9H3T3 888 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 NIP7Q9Y221 180 aaKnown RBP eCLIP12.08□□□□□ -0.48
TCF4-232ENST00000566286 MAST2Q6P0Q8 1798 aa12.08□□□□□ -0.48
TCF4-232ENST00000566286 PVALEFA0A1B0GWK0 134 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 RBAK-RBAKDNI3L0D1 243 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 STXBP3O00186 592 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 MEFVO15553 781 aaPredicted RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 FSBPO95073 299 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 MAPK1P28482 360 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 KCNQ4P56696 695 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 ASTE1Q2TB18 679 aaPredicted RBP12.07□□□□□ -0.48
TCF4-232ENST00000566286 KLHDC7AQ5VTJ3 777 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 PDXDC1Q6P996 788 aa12.07□□□□□ -0.48
TCF4-232ENST00000566286 FOXR2Q6PJQ5 311 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms