RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 NEDD1Q8NHV4 660 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 IFIH1Q9BYX4 1025 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 CBX8Q9HC52 389 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GOLGA8FQ08AF8 430 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GOLGA8DPQ0D2H9 430 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GEN1Q17RS7 908 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 C8orf74Q6P047 294 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 TTC39CQ8N584 583 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GJA10Q969M2 543 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 RUNDC3BQ96NL0 473 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF302Q9NR11 478 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF70Q9UC06 446 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ASIC3Q9UHC3 531 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 CPSF3Q9UKF6 684 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PPP2R3BQ9Y5P8 575 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PLA2G4BP0C869 781 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 MAPK6Q16659 721 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GCOM2Q9BZD3 368 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 RAB17Q9H0T7 212 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 LRRC4Q9HBW1 653 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 CYP2D7A0A087X1C5 515 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 AFPP02771 609 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 SRGAP2BP0DMP2 458 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 NR2F2P24468 414 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 EEF1GP26641 437 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 FKBP3Q00688 224 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 IFRD2Q12894 506 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PFKFB3Q16875 520 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 EPHA10Q5JZY3 1008 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ATP2A3Q93084 1043 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 EXOC4Q96A65 974 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 CACYBPQ9HB71 228 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 MYOZ2Q9NPC6 264 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ERICH4A6NGS2 130 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 HOXA13P31271 388 aaPredicted RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 GTF2A2P52657 109 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 TFAMQ00059 246 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 CEP95Q96GE4 821 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 NLRC4Q9NPP4 1024 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ADARB2Q9NS39 739 aaKnown RBP7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PCDHA7Q9UN72 937 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 ZKSCAN5Q9Y2L8 839 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 LRRC7Q96NW7 1537 aa7.11□□□□□ -1.27
LINC01043-201ENST00000565936 PXDNLA1KZ92 1463 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 GMPSP49915 693 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 UBE2SQ16763 222 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 TRIM58Q8NG06 486 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 RNF139Q8WU17 664 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PRPF31Q8WWY3 499 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PSPC1Q8WXF1 523 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 P3H4Q92791 437 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 NLRP4Q96MN2 994 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PPANQ9NQ55 473 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 TTLL3Q9Y4R7 772 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PFASO15067 1338 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 CEP104O60308 925 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SRGAP2CP0DJJ0 459 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF75DP51815 510 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 ZNF658Q5TYW1 1059 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 CASC4Q6P4E1 433 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 CCDC105Q8IYK2 499 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 RPGRIP1Q96KN7 1286 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 TTC1Q99614 292 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 MSTO1Q9BUK6 570 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 TEX13BQ9BXU2 312 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 FAM49AQ9H0Q0 323 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 LCMT1Q9UIC8 334 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SRPRBQ9Y5M8 271 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 CTNND1O60716 968 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 HUNKP57058 714 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 LMNB2Q03252 620 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 ANGEL2Q5VTE6 544 aaKnown RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 TYW1BQ6NUM6 668 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 BBOF1Q8ND07 529 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 MTRQ99707 1265 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 GGA3Q9NZ52 723 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 KIF28PB7ZC32 967 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 NTSR2O95665 410 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 MYCP01106 439 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 CSF1RP07333 972 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 MARK3P27448 753 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 FCGRTP55899 365 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 KIF23Q02241 960 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 ITKQ08881 620 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SELENOSQ9BQE4 189 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 ANAPC4Q9UJX5 808 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 PSMD14O00487 310 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SLFN14P0C7P3 912 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 USP11P51784 963 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 UAP1Q16222 522 aaPredicted RBP7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SBK1Q52WX2 424 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 C1orf228Q6PIY5 440 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 SIX6OS1Q8N1H7 587 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 BEST2Q8NFU1 509 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 RASGRP4Q8TDF6 673 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 FBF1Q8TES7 1133 aa7.1□□□□□ -1.27
LINC01043-201ENST00000565936 UBLCP1Q8WVY7 318 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms