RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 SCG2P13521 617 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 EVCP57679 992 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 CHMP4BP1P59074 171 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 RUFY3Q7L099 469 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 CYFIP1Q7L576 1253 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 NIPA1Q7RTP0 329 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 TRIM22Q8IYM9 498 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 TIFAQ96CG3 184 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 TCEANC2Q96MN5 208 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 C6orf50Q9HD87 102 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 HDAC6Q9UBN7 1215 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 UBIAD1Q9Y5Z9 338 aa19.14■□□□□ 0.65
USB1-211ENST00000565662 V9GY48 417 aaPredicted RBP19.14■□□□□ 0.65
USB1-211ENST00000565662 C17orf102A2RUQ5 167 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 SMCO2A6NFE2 343 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 STXBP3O00186 592 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 ANAPC15P60006 121 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 SP2Q02086 613 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 GDF6Q6KF10 455 aaPredicted RBP19.13■□□□□ 0.65
USB1-211ENST00000565662 LRRC8DQ7L1W4 858 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 C16orf59Q7L2K0 433 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 RAB11FIP4Q86YS3 637 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 GPKOWQ92917 476 aaPredicted RBP eCLIP19.13■□□□□ 0.65
USB1-211ENST00000565662 GPR20Q99678 358 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 C16orf70Q9BSU1 422 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 ALG1Q9BT22 464 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 C22orf23Q9BZE7 217 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 SEMA6BQ9H3T3 888 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 JADE2Q9NQC1 790 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 RTEL1Q9NZ71 1219 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 UMODL1Q5DID0 1318 aa19.13■□□□□ 0.65
USB1-211ENST00000565662 NFASCO94856 1347 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 PRPF3O43395 683 aaKnown RBP19.12■□□□□ 0.65
USB1-211ENST00000565662 ACRP10323 421 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 HOXC8P31273 242 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 SREBF1P36956 1147 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 SETQ01105 290 aaPredicted RBP19.12■□□□□ 0.65
USB1-211ENST00000565662 APOBRQ0VD83 1088 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 FAM43BQ6ZT52 329 aaPredicted RBP19.12■□□□□ 0.65
USB1-211ENST00000565662 Q7L0L9 218 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 SEPT1Q8WYJ6 367 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 SDF4Q9BRK5 362 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 ANO3Q9BYT9 981 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 ZMYND12Q9H0C1 365 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 ZSWIM6Q9HCJ5 1215 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 SH3GLB2Q9NR46 395 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 TCEAL9Q9UHQ7 104 aa19.12■□□□□ 0.65
USB1-211ENST00000565662 NRCAMQ92823 1304 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 ZBBXA8MT70 800 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 KIF28PB7ZC32 967 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 KCNA2P16389 499 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 IFNAR1P17181 557 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 KCNJ6P48051 423 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 SEMA3FQ13275 785 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 UBE2SQ16763 222 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 CEP55Q53EZ4 464 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 OTOP2Q7RTS6 562 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 REXO1Q8N1G1 1221 aaKnown RBP19.11■□□□□ 0.65
USB1-211ENST00000565662 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
USB1-211ENST00000565662 SCLYQ96I15 445 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 MXRA8Q9BRK3 442 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 FTOQ9C0B1 505 aaKnown RBP eCLIP19.11■□□□□ 0.65
USB1-211ENST00000565662 ERAP1Q9NZ08 941 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 PCDHA11Q9Y5I1 949 aa19.11■□□□□ 0.65
USB1-211ENST00000565662 KAT6AQ92794 2004 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 CPLX1O14810 134 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 CDKL5O76039 1030 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 CKBP12277 381 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 ATP2A2P16615 1042 aaKnown RBP19.1■□□□□ 0.65
USB1-211ENST00000565662 CDC27P30260 824 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 CLK2P49760 499 aaKnown RBP19.1■□□□□ 0.65
USB1-211ENST00000565662 SLC26A2P50443 739 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 COL9A3Q14050 684 aaPredicted RBP19.1■□□□□ 0.65
USB1-211ENST00000565662 ANKRD1Q15327 319 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 TAF2Q6P1X5 1199 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 CNKSR3Q6P9H4 555 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 SERINC5Q86VE9 423 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 ATP6V0A1Q93050 837 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 PBX4Q9BYU1 374 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 SMARCAD1Q9H4L7 1026 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 ZNF576Q9H609 170 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 AZI2Q9H6S1 392 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 SLC28A3Q9HAS3 691 aa19.1■□□□□ 0.65
USB1-211ENST00000565662 JPH1Q9HDC5 661 aaPredicted RBP19.1■□□□□ 0.65
USB1-211ENST00000565662 FAM217BQ9NTX9 383 aaPredicted RBP19.1■□□□□ 0.65
USB1-211ENST00000565662 ABHD14A-ACY1A0A1B0GW23 586 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 hCG_1642624A0A1W2PR95 340 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 CXCL10P02778 98 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 ITGB5P18084 799 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 ADD1P35611 737 aaKnown RBP19.09■□□□□ 0.65
USB1-211ENST00000565662 TCF7P36402 384 aaPredicted RBP19.09■□□□□ 0.65
USB1-211ENST00000565662 ZNF76P36508 570 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 DEFB128Q7Z7B8 93 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 RSPH3Q86UC2 560 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 GUCD1Q96NT3 240 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 GAS2L1Q99501 681 aaPredicted RBP19.09■□□□□ 0.65
USB1-211ENST00000565662 SLC9A2Q9UBY0 812 aa19.09■□□□□ 0.65
USB1-211ENST00000565662 TRIP12Q14669 1992 aaPredicted RBP19.09■□□□□ 0.65
USB1-211ENST00000565662 DOCK5Q9H7D0 1870 aa19.08■□□□□ 0.65
USB1-211ENST00000565662 SMIM10L2AP0DMW4 78 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms