RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CCDC73Q6ZRK6 1079 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 GPR142Q7Z601 462 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 PLEKHH3Q7Z736 793 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 PLA2G4DQ86XP0 818 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 ABRAQ8N0Z2 381 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 FAM133AQ8N9E0 248 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 CYP2W1Q8TAV3 490 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 LENG9Q96B70 501 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 ZFP91Q96JP5 570 aaPredicted RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 MTMR9Q96QG7 549 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 MXRA8Q9BRK3 442 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 CSRNP2Q9H175 543 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 KCNMB3Q9NPA1 279 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 ADD3Q9UEY8 706 aaKnown RBP12.52□□□□□ -0.41
SF3B3-205ENST00000564899 TCHHQ07283 1943 aa12.52□□□□□ -0.41
SF3B3-205ENST00000564899 LTBP2Q14767 1821 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 DNAJC25-GNG10A0A024R161 153 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 IGLV3-22A0A075B6J6 115 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 SOWAHBA6NEL2 793 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 MEIS1O00470 390 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 TBX3O15119 743 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 STRNO43815 780 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 CMA1P23946 247 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 ADORA2AP29274 412 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 LONP1P36776 959 aaKnown RBP12.51□□□□□ -0.41
SF3B3-205ENST00000564899 TXKP42681 527 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
SF3B3-205ENST00000564899 IL17AQ16552 155 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 TMEM266Q2M3C6 531 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 KLHL40Q2TBA0 621 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 RESP18Q5W5W9 173 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 NIPA1Q7RTP0 329 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 VSIG10LQ86VR7 867 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 ETNPPLQ8TBG4 499 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 HAS1Q92839 578 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 IWS1Q96ST2 819 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 MPHOSPH6Q99547 160 aaKnown RBP12.51□□□□□ -0.41
SF3B3-205ENST00000564899 GOLPH3LQ9H4A5 285 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 UBIAD1Q9Y5Z9 338 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 ASTN1O14525 1302 aa12.51□□□□□ -0.41
SF3B3-205ENST00000564899 B4DLN1 442 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 MSH4O15457 936 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 PFKFB1P16118 471 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 ITGB5P18084 799 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 LIG1P18858 919 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 GRB14Q14449 540 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 SPECC1Q5M775 1068 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 SLFN12Q8IYM2 578 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 USP6NLQ92738 828 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 FGD4Q96M96 766 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 FAM20AQ96MK3 541 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 JADE2Q9NQC1 790 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 FAM13BQ9NYF5 915 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 MYH7BA7E2Y1 1941 aa12.5□□□□□ -0.41
SF3B3-205ENST00000564899 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 SLC15A5A6NIM6 579 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 STAM2O75886 525 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 ARP10275 920 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 CAPN2P17655 700 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 EDNRBP24530 442 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 TXLNAP40222 546 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 TECP42680 631 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.418e-8■■■■■ 29.6
SF3B3-205ENST00000564899 NDUFA8P51970 172 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 FAM160A1Q05DH4 1040 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 PDE4DQ08499 809 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 MTMR1Q13613 665 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 STXBP2Q15833 593 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 ZNF792Q3KQV3 632 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 GNPTABQ3T906 1256 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 SYMPKQ92797 1274 aaKnown RBP12.49□□□□□ -0.41
SF3B3-205ENST00000564899 GJA10Q969M2 543 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 ZNF577Q9BSK1 485 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 WDR11Q9BZH6 1224 aa12.49□□□□□ -0.41
SF3B3-205ENST00000564899 TTC12Q9H892 705 aaPredicted RBP12.49□□□□□ -0.41
SF3B3-205ENST00000564899 LOC102724159A0A0B4J2E5 919 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 FAM237AA0A1B0GTK4 181 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 PP2D1A8MPX8 630 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 COBLO75128 1261 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 EIF3JO75822 258 aaKnown RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 ATN1P54259 1190 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 PWP2Q15269 919 aaKnown RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 C9orf50Q5SZB4 431 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 CAVIN1Q6NZI2 390 aaKnown RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 USP49Q70CQ1 688 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 GPRASP2Q96D09 838 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 EPSTI1Q96J88 318 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 AK8Q96MA6 479 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 INPP4AQ96PE3 977 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 CDX2Q99626 313 aaPredicted RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 KCNH7Q9NS40 1196 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 DDX19AQ9NUU7 478 aaKnown RBP12.48□□□□□ -0.41
SF3B3-205ENST00000564899 DACT1Q9NYF0 836 aa12.48□□□□□ -0.41
SF3B3-205ENST00000564899 RAPGEFL1Q9UHV5 662 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms