RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TET1Q8NFU7 2136 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 GPKOWQ92917 476 aaPredicted RBP eCLIP14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 ATP6V0A1Q93050 837 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 GPRASP2Q96D09 838 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 NEK1Q96PY6 1258 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 GPR20Q99678 358 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 EHMT1Q9H9B1 1298 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 RBM28Q9NW13 759 aaKnown RBP14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 RTEL1Q9NZ71 1219 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 ZNF215Q9UL58 517 aaPredicted RBP14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 EYSQ5T1H1 3165 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 RSPH10B2B2RC85 870 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 GTPBP6O43824 516 aaPredicted RBP14□□□□□ -0.17
GTF3C1-204ENST00000564664 TLL1O43897 1013 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 PLEKHA8P1O95397 391 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 HMGB1P09429 215 aaKnown RBP14□□□□□ -0.17
GTF3C1-204ENST00000564664 RSPH10BP0C881 870 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 SMIM10L2AP0DMW4 78 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 SMIM10L2BP0DMW5 78 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 WDR5P61964 334 aaKnown RBP14□□□□□ -0.17
GTF3C1-204ENST00000564664 SEMA3FQ13275 785 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 ZNF618Q5T7W0 954 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 TRAF7Q6Q0C0 670 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 TMTC3Q6ZXV5 915 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 DHX32Q7L7V1 743 aaKnown RBP14□□□□□ -0.17
GTF3C1-204ENST00000564664 USP38Q8NB14 1042 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 RAD9AQ99638 391 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 GLT8D2Q9H1C3 349 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 RNPEPQ9H4A4 650 aa14□□□□□ -0.17
GTF3C1-204ENST00000564664 SPDYE3A6NKU9 549 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 LGR5O75473 907 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 THPOP40225 353 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 RCAN1P53805 252 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 MRPS5P82675 430 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 ZNF200P98182 395 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 EXOSC10Q01780 885 aaKnown RBP13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 TAP1Q03518 808 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 ZFP91Q96JP5 570 aaPredicted RBP13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 THEGQ9P2T0 379 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 TTC28Q96AY4 2481 aa13.99□□□□□ -0.17
GTF3C1-204ENST00000564664 NRCAMQ92823 1304 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 GBF1Q92538 1859 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 hCG_1984214I3L0E3 225 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 SORBS3O60504 671 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 GJB5O95377 273 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 FOSP01100 380 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 AAK1Q2M2I8 961 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 PPP1R18Q6NYC8 613 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 RPAINQ86UA6 219 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 ZNF713Q8N859 430 aaPredicted RBP13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 PPM1EQ8WY54 764 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 SEPT1Q8WYJ6 367 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 TNPO1Q92973 898 aaKnown RBP13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 ASB2Q96Q27 587 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 BCAS3Q9H6U6 928 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 UBIAD1Q9Y5Z9 338 aa13.98□□□□□ -0.17
GTF3C1-204ENST00000564664 TREHO43280 583 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 CDC45O75419 566 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 RPLP2P05387 115 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 RXRAP19793 462 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 ADAM17P78536 824 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 MTMR1Q13613 665 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 HIC1Q14526 733 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 PLEKHG4Q58EX7 1191 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 FAM26DQ5JW98 314 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 APOA5Q6Q788 366 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 MICU3Q86XE3 530 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 CMTR1Q8N1G2 835 aaKnown RBP13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 SEPT8Q92599 483 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 WNT8BQ93098 351 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 LRRC2Q9BYS8 371 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 JADE2Q9NQC1 790 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 PCDHA6Q9UN73 950 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 INSL6Q9Y581 213 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 PCDHA8Q9Y5H6 950 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 MTCH2Q9Y6C9 303 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 CHD7Q9P2D1 2997 aa13.97□□□□□ -0.17
GTF3C1-204ENST00000564664 CCDC196A0A1B0GTZ2 297 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 ZBTB43O43298 467 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 AMHP03971 560 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 KCNA2P16389 499 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 ITGB5P18084 799 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 MBTPS1Q14703 1052 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 CCDC85BQ15834 202 aaPredicted RBP13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 RTN1Q16799 776 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 TAF2Q6P1X5 1199 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 HEATR3Q7Z4Q2 680 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 CCDC82Q8N4S0 544 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 APBB2Q92870 758 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 SMARCAD1Q9H4L7 1026 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 RIC8AQ9NPQ8 531 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 SETD4Q9NVD3 440 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 VCANP13611 3396 aa13.96□□□□□ -0.17
GTF3C1-204ENST00000564664 ATP9AO75110 1047 aa13.95□□□□□ -0.18
GTF3C1-204ENST00000564664 TCF7P36402 384 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms