RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TRIP12Q14669 1992 aaPredicted RBP21.8■■□□□ 1.08
NME3-207ENST00000564628 LPXNO60711 386 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 SEC24BO95487 1268 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 EVCP57679 992 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 TRAF1Q13077 416 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 C8orf34Q49A92 452 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 KRT40Q6A162 431 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 C7orf31Q8N865 590 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 BRF1Q92994 677 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 HLA-CQ95604 372 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 RBM28Q9NW13 759 aaKnown RBP21.8■■□□□ 1.08
NME3-207ENST00000564628 LMCD1Q9NZU5 365 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 PCDHA1Q9Y5I3 950 aa21.8■■□□□ 1.08
NME3-207ENST00000564628 ABHD14A-ACY1A0A1B0GW23 586 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 F2P00734 622 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 CKBP12277 381 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 FUT2Q10981 343 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 LAMC2Q13753 1193 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 ARHGEF16Q5VV41 709 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 PPTC7Q8NI37 304 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 FAM217BQ9NTX9 383 aaPredicted RBP21.79■■□□□ 1.08
NME3-207ENST00000564628 CNTNAP5Q8WYK1 1306 aa21.79■■□□□ 1.08
NME3-207ENST00000564628 NBNO60934 754 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 EFCAB14O75071 495 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 NR3C2P08235 984 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 PSEN2P49810 448 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 HSD17B4P51659 736 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 FGD1P98174 961 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 PTK7Q13308 1070 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 RTN1Q16799 776 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 CMTR1Q8N1G2 835 aaKnown RBP21.78■■□□□ 1.08
NME3-207ENST00000564628 RRP36Q96EU6 259 aaKnown RBP21.78■■□□□ 1.08
NME3-207ENST00000564628 ZBED2Q9BTP6 218 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 PXMP2Q9NR77 195 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 HDAC6Q9UBN7 1215 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 RAPGEFL1Q9UHV5 662 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 CYP46A1Q9Y6A2 500 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 MRVI1Q9Y6F6 885 aa21.78■■□□□ 1.08
NME3-207ENST00000564628 COL4A4P53420 1690 aaPredicted RBP21.78■■□□□ 1.08
NME3-207ENST00000564628 LCHNA4D1U4 455 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 GOLGA8AA7E2F4 631 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 GOLGA8BA8MQT2 603 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 HAS3O00219 553 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 GJB5O95377 273 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 HOXD8P13378 290 aaPredicted RBP21.77■■□□□ 1.08
NME3-207ENST00000564628 EIF2AK2P19525 551 aaKnown RBP21.77■■□□□ 1.08
NME3-207ENST00000564628 TOB2Q14106 344 aaPredicted RBP21.77■■□□□ 1.08
NME3-207ENST00000564628 MFSD10Q14728 455 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 SAMD3Q8N6K7 520 aa21.77■■□□□ 1.08
NME3-207ENST00000564628 UPF3BQ9BZI7 483 aaKnown RBP21.77■■□□□ 1.08
NME3-207ENST00000564628 MAP3K20Q9NYL2 800 aaKnown RBP21.77■■□□□ 1.08
NME3-207ENST00000564628 DEFB103AP81534 67 aa21.76■■□□□ 1.07
NME3-207ENST00000564628 KIAA0753Q2KHM9 967 aa21.76■■□□□ 1.07
NME3-207ENST00000564628 KCNV1Q6PIU1 500 aa21.76■■□□□ 1.07
NME3-207ENST00000564628 SPRED2Q7Z698 418 aa21.76■■□□□ 1.07
NME3-207ENST00000564628 RAD9AQ99638 391 aa21.76■■□□□ 1.07
NME3-207ENST00000564628 PPFIA4O75335 1185 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 CFBP00751 764 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 CDC27P30260 824 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 PLA2G5P39877 138 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 IKBKEQ14164 716 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 TRIM71Q2Q1W2 868 aaKnown RBP21.75■■□□□ 1.07
NME3-207ENST00000564628 TRAF7Q6Q0C0 670 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 TMCO2Q7Z6W1 182 aaPredicted RBP21.75■■□□□ 1.07
NME3-207ENST00000564628 DHX37Q8IY37 1157 aaKnown RBP21.75■■□□□ 1.07
NME3-207ENST00000564628 PIBF1Q8WXW3 757 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 ALG1Q9BT22 464 aa21.75■■□□□ 1.07
NME3-207ENST00000564628 SEC63Q9UGP8 760 aaKnown RBP21.75■■□□□ 1.07
NME3-207ENST00000564628 ZNF286BP0CG31 522 aa21.74■■□□□ 1.07
NME3-207ENST00000564628 METAP2P50579 478 aaKnown RBP eCLIP21.74■■□□□ 1.07
NME3-207ENST00000564628 ERVK-21P61565 698 aa21.74■■□□□ 1.07
NME3-207ENST00000564628 TGS1Q96RS0 853 aaKnown RBP21.74■■□□□ 1.07
NME3-207ENST00000564628 PDCD2LQ9BRP1 358 aa21.74■■□□□ 1.07
NME3-207ENST00000564628 RGS20O76081 388 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 TCTN1Q2MV58 587 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 ZNF618Q5T7W0 954 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 MYSM1Q5VVJ2 828 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 GDPD5Q8WTR4 605 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 SUGCTQ9HAC7 445 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 EMSYQ7Z589 1322 aa21.73■■□□□ 1.07
NME3-207ENST00000564628 CCDC196A0A1B0GTZ2 297 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 LINC01553A4QN01 128 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 TGFB3P10600 412 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 PDIA3P30101 505 aaKnown RBP21.72■■□□□ 1.07
NME3-207ENST00000564628 ADD1P35611 737 aaKnown RBP21.72■■□□□ 1.07
NME3-207ENST00000564628 MBTPS1Q14703 1052 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 CELF3Q5SZQ8 465 aaKnown RBP21.72■■□□□ 1.07
NME3-207ENST00000564628 VSIG10LQ86VR7 867 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 WNT8BQ93098 351 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 FAM122AQ96E09 287 aa21.72■■□□□ 1.07
NME3-207ENST00000564628 ARIH1Q9Y4X5 557 aaPredicted RBP21.72■■□□□ 1.07
NME3-207ENST00000564628 hCG_1642624A0A1W2PR95 340 aa21.71■■□□□ 1.07
NME3-207ENST00000564628 LGR5O75473 907 aa21.71■■□□□ 1.07
NME3-207ENST00000564628 SPATA33Q96N06 139 aa21.71■■□□□ 1.07
NME3-207ENST00000564628 PDRG1Q9NUG6 133 aa21.71■■□□□ 1.07
NME3-207ENST00000564628 NAP1L2Q9ULW6 460 aaPredicted RBP21.71■■□□□ 1.07
NME3-207ENST00000564628 GCOM1H8Y6P7 765 aaPredicted RBP21.7■■□□□ 1.06
NME3-207ENST00000564628 PIK3CDO00329 1044 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms