RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 AFG1LQ8WV93 481 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 LENG9Q96B70 501 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 SENP6Q9GZR1 1112 aaPredicted RBP18.94■□□□□ 0.62
RNF40-206ENST00000564260 JPH1Q9HDC5 661 aaPredicted RBP18.94■□□□□ 0.62
RNF40-206ENST00000564260 STARD7Q9NQZ5 370 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 TCEAL9Q9UHQ7 104 aa18.94■□□□□ 0.62
RNF40-206ENST00000564260 A0A0U1RQG5 324 aaPredicted RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 MYADML2A6NDP7 307 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 H3BQV1 296 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 CAPN15O75808 1086 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 MLLT1Q03111 559 aaPredicted RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 PTPN11Q06124 597 aaPredicted RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 NR5A1Q13285 461 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 GNL2Q13823 731 aaKnown RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 INF2Q27J81 1249 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 LARP1BQ659C4 914 aaKnown RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 CYFIP1Q7L576 1253 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 CYP2W1Q8TAV3 490 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 DIS3LQ8TF46 1054 aaKnown RBP18.93■□□□□ 0.62
RNF40-206ENST00000564260 COPS5Q92905 334 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 FAM20AQ96MK3 541 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 TOX2Q96NM4 488 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 ZNF577Q9BSK1 485 aa18.93■□□□□ 0.62
RNF40-206ENST00000564260 F2P00734 622 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 MYCNP04198 464 aaPredicted RBP18.92■□□□□ 0.62
RNF40-206ENST00000564260 BEX3Q00994 111 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 KRT76Q01546 638 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 HSDL1Q3SXM5 330 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 PRR16Q569H4 304 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 TMEM63BQ5T3F8 832 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 ZNF746Q6NUN9 644 aaPredicted RBP18.92■□□□□ 0.62
RNF40-206ENST00000564260 SLC39A5Q6ZMH5 540 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 SMAP1Q8IYB5 467 aaPredicted RBP18.92■□□□□ 0.62
RNF40-206ENST00000564260 SLC43A3Q8NBI5 491 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 SEPT1Q8WYJ6 367 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 SLC9A2Q9UBY0 812 aa18.92■□□□□ 0.62
RNF40-206ENST00000564260 DDX25Q9UHL0 483 aaKnown RBP18.92■□□□□ 0.62
RNF40-206ENST00000564260 NOL7Q9UMY1 257 aaKnown RBP18.92■□□□□ 0.62
RNF40-206ENST00000564260 MKI67P46013 3256 aaKnown RBP18.91■□□□□ 0.62
RNF40-206ENST00000564260 EDIL3O43854 480 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 ATP9AO75110 1047 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 ARP10275 920 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 BECN1Q14457 450 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 LETM2Q2VYF4 491 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 NFRKBQ6P4R8 1299 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 ANKRD33Q7Z3H0 272 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 SESTD1Q86VW0 696 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 RDM1Q8NG50 284 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 TNPO1Q92973 898 aaKnown RBP18.91■□□□□ 0.62
RNF40-206ENST00000564260 GPR20Q99678 358 aa18.91■□□□□ 0.62
RNF40-206ENST00000564260 ZNF215Q9UL58 517 aaPredicted RBP18.91■□□□□ 0.62
RNF40-206ENST00000564260 CCNT1O60563 726 aaKnown RBP18.9■□□□□ 0.62
RNF40-206ENST00000564260 HSP90AA1P07900 732 aaKnown RBP18.9■□□□□ 0.62
RNF40-206ENST00000564260 SLC26A2P50443 739 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 ITGB3BPQ13352 177 aaPredicted RBP18.9■□□□□ 0.62
RNF40-206ENST00000564260 CXCL17Q6UXB2 119 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 SLFN12Q8IYM2 578 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 SLC5A5Q92911 643 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 ZFP91Q96JP5 570 aaPredicted RBP18.9■□□□□ 0.62
RNF40-206ENST00000564260 KCNMB3Q9NPA1 279 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 EMSYQ7Z589 1322 aa18.9■□□□□ 0.62
RNF40-206ENST00000564260 ARVCFO00192 962 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 MSH4O15457 936 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 DHX15O43143 795 aaKnown RBP18.89■□□□□ 0.61
RNF40-206ENST00000564260 ATG7O95352 703 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 MYL3P08590 195 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 SFNP31947 248 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 CDK7P50613 346 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 GUCY1B3Q02153 619 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 RILPL1Q5EBL4 403 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 BRAPQ7Z569 592 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 ETNPPLQ8TBG4 499 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 NR2E3Q9Y5X4 410 aa18.89■□□□□ 0.61
RNF40-206ENST00000564260 BAG4O95429 457 aaKnown RBP18.88■□□□□ 0.61
RNF40-206ENST00000564260 TDP2O95551 362 aa18.88■□□□□ 0.61
RNF40-206ENST00000564260 ITGA7Q13683 1181 aa18.88■□□□□ 0.61
RNF40-206ENST00000564260 EARS2Q5JPH6 523 aaKnown RBP18.88■□□□□ 0.61
RNF40-206ENST00000564260 MYH7BA7E2Y1 1941 aa18.88■□□□□ 0.61
RNF40-206ENST00000564260 WDR64B1ANS9 1081 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 HAS3O00219 553 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 TLR3O15455 904 aaKnown RBP18.87■□□□□ 0.61
RNF40-206ENST00000564260 NEMFO60524 1076 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 GAS7O60861 476 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 DTNBO60941 627 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 LGR5O75473 907 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 PSMD10O75832 226 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 LGALS2P05162 132 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 SUPT20HL2P0C7V6 817 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 JAK3P52333 1124 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 ACTR2P61160 394 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 LRCH2Q5VUJ6 765 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 PLPPR4Q7Z2D5 763 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 FERMT2Q96AC1 680 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 C16orf70Q9BSU1 422 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 TEKT3Q9BXF9 490 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 SMARCAD1Q9H4L7 1026 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 AZI2Q9H6S1 392 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 ERAP1Q9NZ08 941 aa18.87■□□□□ 0.61
RNF40-206ENST00000564260 IGKV6D-21A0A0A0MT36 114 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms