RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 LRRC37A2A6NM11 1700 aa19.16■□□□□ 0.66
CMTM3-208ENST00000564247 RANBP2P49792 3224 aaKnown RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 FAM86B1E9PN63 330 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 TBX3O15119 743 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 MAFGO15525 162 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 DUSP11O75319 330 aaKnown RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 PRPF40AO75400 957 aaKnown RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 FAM86B2P0C5J1 330 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 OR52Z1P0C646 297 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 PTMSP20962 102 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 MARCKSP29966 332 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 MRPS9P82933 396 aaKnown RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 LRRC26Q2I0M4 334 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 CCDC144BQ3MJ40 725 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 DTHD1Q6ZMT9 781 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 RNF180Q86T96 592 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 SLFN12Q8IYM2 578 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 C7orf61Q8IZ16 206 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 MORC4Q8TE76 937 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 FERMT2Q96AC1 680 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 ZFP91Q96JP5 570 aaPredicted RBP19.15■□□□□ 0.66
CMTM3-208ENST00000564247 JADE2Q9NQC1 790 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 ELP1O95163 1332 aa19.15■□□□□ 0.66
CMTM3-208ENST00000564247 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 SLC37A4O43826 429 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 ADAMTS4O75173 837 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 PGK1P00558 417 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 MYCNP04198 464 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-208ENST00000564247 EDNRBP24530 442 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 MCM4P33991 863 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 PRPHP41219 470 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 POTEDQ86YR6 584 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 C4orf32Q8N8J7 132 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 KRI1Q8N9T8 703 aaKnown RBP19.14■□□□□ 0.65
CMTM3-208ENST00000564247 CYP2W1Q8TAV3 490 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 LENG1Q96BZ8 264 aaPredicted RBP19.14■□□□□ 0.65
CMTM3-208ENST00000564247 CDHR1Q96JP9 859 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 FAM20AQ96MK3 541 aa19.14■□□□□ 0.65
CMTM3-208ENST00000564247 SRPRBQ9Y5M8 271 aaKnown RBP19.14■□□□□ 0.65
CMTM3-208ENST00000564247 IGLV3-22A0A075B6J6 115 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 ADCYAP1R1P41586 468 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 MTMR1Q13613 665 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 TMEM266Q2M3C6 531 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 TMEM87AQ8NBN3 555 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 GPRASP2Q96D09 838 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 TMEM60Q9H2L4 133 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 PHF24Q9UPV7 400 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 SYNRGQ9UMZ2 1314 aa19.13■□□□□ 0.65
CMTM3-208ENST00000564247 ADCY6O43306 1168 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 CUTAO60888 179 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 ITGB5P18084 799 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 TXKP42681 527 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 KLHDC9Q8NEP7 349 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 INPP4AQ96PE3 977 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-208ENST00000564247 MTMR9Q96QG7 549 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 ZNF577Q9BSK1 485 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 TSEN34Q9BSV6 310 aaKnown RBP19.12■□□□□ 0.65
CMTM3-208ENST00000564247 RAB34Q9BZG1 259 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 WDR11Q9BZH6 1224 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 VTA1Q9NP79 307 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 KCNH7Q9NS40 1196 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 PCDHA7Q9UN72 937 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
CMTM3-208ENST00000564247 COLQQ9Y215 455 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-208ENST00000564247 MSH4O15457 936 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 ARP10275 920 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 ATN1P54259 1190 aaPredicted RBP19.11■□□□□ 0.65
CMTM3-208ENST00000564247 GJA9P57773 515 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 ADALQ6DHV7 355 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 KCNV1Q6PIU1 500 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 CHRDL2Q6WN34 429 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 SLC39A5Q6ZMH5 540 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 SEPT14Q6ZU15 432 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 LENG9Q96B70 501 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 UPF3AQ9H1J1 476 aaKnown RBP19.11■□□□□ 0.65
CMTM3-208ENST00000564247 KCNMB3Q9NPA1 279 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 MRVI1Q9Y6F6 885 aa19.11■□□□□ 0.65
CMTM3-208ENST00000564247 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
CMTM3-208ENST00000564247 VWA3AA6NCI4 1184 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 CST5P28325 142 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 LONP1P36776 959 aaKnown RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 NKX3-2P78367 333 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 TNFAIP2Q03169 654 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 SNX17Q15036 470 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 HABP4Q5JVS0 413 aaKnown RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 C1orf53Q5VUE5 145 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 IQSEC1Q6DN90 963 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 CCSAPQ6IQ19 270 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 TAPT1Q6NXT6 567 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 FBXO16Q8IX29 292 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 ETNPPLQ8TBG4 499 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 HAS1Q92839 578 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 PRO3102Q9H379 93 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 TTC12Q9H892 705 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 SPC25Q9HBM1 224 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 AGO4Q9HCK5 861 aaKnown RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 TBC1D22BQ9NU19 505 aa19.1■□□□□ 0.65
CMTM3-208ENST00000564247 FBXO2Q9UK22 296 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 ZMYND8Q9ULU4 1186 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-208ENST00000564247 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms