RNA–Protein interactions for RNA: ENST00000564079.5

TUBGCP4-208, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TUBGCP4, Length 6,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-208ENST00000564079 PEG3Q9GZU2 1588 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L15C9J2P7 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L13C9JLJ4 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L11C9JVI0 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L18D6R9N7 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L22D6RA61 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L17D6RBQ6 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L19D6RCP7 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L20D6RJB6 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 STAT3P40763 770 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 FCGRTP55899 365 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 USP17L24Q0WX57 530 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 ZNF827Q17R98 1081 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 TMEM62Q0P6H9 643 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 THOC5Q13769 683 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 RASGRF1Q13972 1273 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 NSUN6Q8TEA1 469 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 PIGOQ8TEQ8 1089 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 STMN2Q93045 179 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 METTL14Q9HCE5 456 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 NVLO15381 856 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 RPN1P04843 607 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 ADD2P35612 726 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 MTX1Q13505 466 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 MESDQ14696 234 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 RMDN2Q96LZ7 410 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 NR2F2P24468 414 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 PSMC2P35998 433 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 MAP7Q14244 749 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 EXOC3L4Q17RC7 722 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 KCTD6Q8NC69 237 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 VPS18Q9P253 973 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 PMLP29590 882 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 NAA25Q14CX7 972 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 ARL13BQ3SXY8 428 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 SWSAP1Q6NVH7 229 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 ANKRD42Q8N9B4 389 aa13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 LARP4BQ92615 738 aaKnown RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
TUBGCP4-208ENST00000564079 KCNK3O14649 394 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 MOCS2O96007 188 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PCP11498 1178 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 DBNLQ9UJU6 430 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PTPN22Q9Y2R2 807 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 IGSF1Q8N6C5 1336 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PNMA6FA0A0J9YX94 578 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 TADA2AO75478 443 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ARL4DP49703 201 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 TXNP10599 105 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ME3Q16798 604 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 FAM186BQ8IYM0 893 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 RAB3IPQ96QF0 476 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 C2CD2LO14523 706 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 HSPH1Q92598 858 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 EXT2Q93063 718 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PUS7LQ9H0K6 701 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ATP11BQ9Y2G3 1177 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PRRG1O14668 218 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 IRF1P10914 325 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 IGFBP4P22692 258 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 RAB44Q7Z6P3 723 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 CPVLQ9H3G5 476 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 MAP3K20Q9NYL2 800 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 MYOM2P54296 1465 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ASB14A6NK59 587 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 MYL1P05976 194 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 MAPK6Q16659 721 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ZNF513Q8N8E2 541 aaPredicted RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 ATP6V0A4Q9HBG4 840 aa13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 PIH1D3Q9NQM4 214 aaKnown RBP13.09□□□□□ -0.31
TUBGCP4-208ENST00000564079 GBP1P32455 592 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 NAA35Q5VZE5 725 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 BEST2Q8NFU1 509 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 BRIP1Q9BX63 1249 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 NUF2Q9BZD4 464 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 PIN4Q9Y237 131 aaKnown RBP13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 GAP43P17677 238 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 GARSP41250 739 aaKnown RBP13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 MXD3Q9BW11 206 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 ESRRBO95718 433 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 NEDD9Q14511 834 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 DCAF4Q8WV16 495 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 UBE2TQ9NPD8 197 aaPredicted RBP13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 PHBP35232 272 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 FAM167AQ96KS9 214 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 ABCA5Q8WWZ7 1642 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 TRAPPC10P48553 1259 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 BPIFB4P59827 614 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 TTLL11Q8NHH1 800 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
TUBGCP4-208ENST00000564079 TMEM206Q9H813 350 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms