RNA–Protein interactions for RNA: ENST00000563686.5

TCF4-218, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 6,012 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-218ENST00000563686 TRIM31Q9BZY9 425 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 UBE2Q2LH0YL09 131 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 PGRMC1O00264 195 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 SLC16A3O15427 465 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 FKBP3Q00688 224 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 PKN1Q16512 942 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 RC3H1Q5TC82 1133 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 LRP10Q7Z4F1 713 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 GSPT2Q8IYD1 628 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 ACCSQ96QU6 501 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 HPCAL4Q9UM19 191 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 MARF1Q9Y4F3 1742 aaKnown RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 ATP2A1O14983 1001 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 ZSCAN20P17040 1043 aaPredicted RBP6.25□□□□□ -1.41
TCF4-218ENST00000563686 ATP1A2P50993 1020 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 SEC23AQ15436 765 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 CEP95Q96GE4 821 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 ZNF577Q9BSK1 485 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 CCSER1Q9C0I3 900 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 STIM2Q9P246 746 aa6.25□□□□□ -1.41
TCF4-218ENST00000563686 MEIS1O00470 390 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 NCK2O43639 380 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 VIMP08670 466 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 MYCLP12524 364 aaPredicted RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 IBSPP21815 317 aaPredicted RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 KLK7P49862 253 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 MFAP3P55082 362 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 ERVK-24P63145 666 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 EMBQ6PCB8 327 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 TRMT1LQ7Z2T5 733 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 GIMAP8Q8ND71 665 aaPredicted RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 CHURC1Q8WUH1 139 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 IMPG2Q9BZV3 1241 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 DHX36Q9H2U1 1008 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 SYNCQ9H7C4 482 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 PSD3Q9NYI0 1048 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 POTEMA6NI47 508 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 HMGB1P1B2RPK0 211 aaPredicted RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 LRCH2Q5VUJ6 765 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 NFRKBQ6P4R8 1299 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 OTUD6AQ7L8S5 288 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 CCDC105Q8IYK2 499 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 FAM186BQ8IYM0 893 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 FNBP1Q96RU3 617 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 PPANQ9NQ55 473 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 FLT1P17948 1338 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 ZNF18P17022 549 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 SMARCA1P28370 1054 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 ITPK1Q13572 414 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 RSRC2Q7L4I2 434 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 MSANTD4Q8NCY6 345 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 HNRNPLLQ8WVV9 542 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 IWS1Q96ST2 819 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 DPH5Q9H2P9 285 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 NKIRAS1Q9NYS0 192 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 PLAAQ9Y263 795 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 IKBKGQ9Y6K9 419 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 CAPN7Q9Y6W3 813 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 SPATA31A5Q5VU36 1347 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 SPATA31A7Q8IWB4 1347 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 NPHP3-ACAD11A0A0J9YXS1 232 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 EZRP15311 586 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 ATP2A2P16615 1042 aaKnown RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 ABCB4P21439 1286 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 CCT5P48643 541 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 FXR2P51116 673 aaKnown RBP eCLIP6.24□□□□□ -1.41
TCF4-218ENST00000563686 SNAP25P60880 206 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 ATP11AP98196 1134 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 PABPC4Q13310 644 aaKnown RBP eCLIP6.24□□□□□ -1.41
TCF4-218ENST00000563686 PDIA5Q14554 519 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 CDKAL1Q5VV42 579 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 DAAM1Q9Y4D1 1078 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 TLDC2A0PJX2 215 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 TCP10L2B9ZVM9 353 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 GFPT2O94808 682 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 H2AFZP0C0S5 128 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 FXR1P51114 621 aaKnown RBP eCLIP6.24□□□□□ -1.41
TCF4-218ENST00000563686 HERVK_113P62684 666 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 ARHGEF16Q5VV41 709 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 H2AFVQ71UI9 128 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 NLRX1Q86UT6 975 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 MMS19Q96T76 1030 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 TMEM206Q9H813 350 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 KANSL2Q9H9L4 492 aa6.24□□□□□ -1.41
TCF4-218ENST00000563686 PPP1R1BQ9UD71 204 aaPredicted RBP6.24□□□□□ -1.41
TCF4-218ENST00000563686 ZNF185O15231 689 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 NPR1P16066 1061 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 KCNQ4P56696 695 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 CYP27A1Q02318 531 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 ALCAMQ13740 583 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 SETDB1Q15047 1291 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 TRAPPC11Q7Z392 1133 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 HINFPQ9BQA5 517 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 RIOK1Q9BRS2 568 aaKnown RBP6.23□□□□□ -1.41
TCF4-218ENST00000563686 CNOT10Q9H9A5 744 aaKnown RBP6.23□□□□□ -1.41
TCF4-218ENST00000563686 TRIM10Q9UDY6 481 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 ADAM21Q9UKJ8 722 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 SIPA1L3O60292 1781 aaPredicted RBP6.23□□□□□ -1.41
TCF4-218ENST00000563686 USP17L10C9JJH3 530 aa6.23□□□□□ -1.41
TCF4-218ENST00000563686 CLIC2O15247 247 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms