RNA–Protein interactions for RNA: ENST00000563670.1

HERC2-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 5

Gene HERC2, Length 618 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-203ENST00000563670 BRWD1Q9NSI6 2320 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CPLX1O14810 134 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 ATP2A1O14983 1001 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 STRNO43815 780 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 ICAM1P05362 532 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 ERCC3P19447 782 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 AK2P54819 239 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CCT2P78371 535 aaKnown RBP9.79□□□□□ -0.84
HERC2-203ENST00000563670 STK3Q13188 491 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CDC37Q16543 378 aaPredicted RBP9.79□□□□□ -0.84
HERC2-203ENST00000563670 TRIM67Q6ZTA4 783 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 FBXO11Q86XK2 927 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 HOMER1Q86YM7 354 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 ADSSL1Q8N142 457 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CCDC82Q8N4S0 544 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CHST13Q8NET6 341 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 REPS2Q8NFH8 660 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 NPLOC4Q8TAT6 608 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 NEK9Q8TD19 979 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 PIBF1Q8WXW3 757 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 ARNTL2Q8WYA1 636 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 MMP19Q99542 508 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CPVLQ9H3G5 476 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 JMJD4Q9H9V9 463 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 CERS4Q9HA82 394 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 SLC5A4Q9NY91 659 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 MUTYHQ9UIF7 546 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 FAM50BQ9Y247 325 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 GPR179Q6PRD1 2367 aa9.79□□□□□ -0.84
HERC2-203ENST00000563670 H0Y858 1186 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 ZBTB5O15062 677 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 CDKL5O76039 1030 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 PLEKHA8P1O95397 391 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 FCER1AP12319 257 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 ATP2A2P16615 1042 aaKnown RBP9.78□□□□□ -0.84
HERC2-203ENST00000563670 PTPREP23469 700 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 PDIA3P30101 505 aaKnown RBP9.78□□□□□ -0.84
HERC2-203ENST00000563670 EVCP57679 992 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 TAP1Q03518 808 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 GRB14Q14449 540 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 QRICH1Q2TAL8 776 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 USH1GQ495M9 461 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 TMTC3Q6ZXV5 915 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 OTOP2Q7RTS6 562 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 RNF180Q86T96 592 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 DPP9Q86TI2 863 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 ANKRD35Q8N283 1001 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 DDX11Q96FC9 970 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 ZSCAN31Q96LW9 406 aaPredicted RBP9.78□□□□□ -0.84
HERC2-203ENST00000563670 AGBL1Q96MI9 1066 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 TRERF1Q96PN7 1200 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 PIGSQ96S52 555 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 SPZ1Q9BXG8 430 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 AMNQ9BXJ7 453 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 RIOX1Q9H6W3 641 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 ACAD9Q9H845 621 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 TLR9Q9NR96 1032 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 HOMER2Q9NSB8 354 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 RNF146Q9NTX7 359 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 RALYQ9UKM9 306 aaKnown RBP9.78□□□□□ -0.84
HERC2-203ENST00000563670 ZNF214Q9UL59 606 aaPredicted RBP9.78□□□□□ -0.84
HERC2-203ENST00000563670 ABCB11O95342 1321 aa9.78□□□□□ -0.84
HERC2-203ENST00000563670 FAM208BQ5VWN6 2430 aa9.77□□□□□ -0.84
HERC2-203ENST00000563670 PNMA6FA0A0J9YX94 578 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 ADD1P35611 737 aaKnown RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 MCM2P49736 904 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 TRIM22Q8IYM9 498 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 CMTR1Q8N1G2 835 aaKnown RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 SRBD1Q8N5C6 995 aaKnown RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 NKD2Q969F2 451 aaPredicted RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 TSEN34Q9BSV6 310 aaKnown RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 XPNPEP3Q9NQH7 507 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 LIMCH1Q9UPQ0 1083 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 MRPL11Q9Y3B7 192 aaKnown RBP9.77□□□□□ -0.85
HERC2-203ENST00000563670 PCDHA1Q9Y5I3 950 aa9.77□□□□□ -0.85
HERC2-203ENST00000563670 MCM3APO60318 1980 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 PFKFB2O60825 505 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 HOXB3P14651 431 aaPredicted RBP9.76□□□□□ -0.85
HERC2-203ENST00000563670 CDC27P30260 824 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 AVPR2P30518 371 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 CDK7P50613 346 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
HERC2-203ENST00000563670 SSRP1Q08945 709 aaKnown RBP9.76□□□□□ -0.85
HERC2-203ENST00000563670 MCTP2Q6DN12 878 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 NSMFQ6X4W1 530 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 MCF2L2Q86YR7 1114 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 ABRAQ8N0Z2 381 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 MTMR8Q96EF0 704 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 POP1Q99575 1024 aaKnown RBP9.76□□□□□ -0.85
HERC2-203ENST00000563670 KIF2CQ99661 725 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 SLC26A6Q9BXS9 759 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 STARD7Q9NQZ5 370 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 DLL3Q9NYJ7 618 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 TPCN1Q9ULQ1 816 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 RIPK3Q9Y572 518 aa9.76□□□□□ -0.85
HERC2-203ENST00000563670 MAP1BP46821 2468 aaKnown RBP9.76□□□□□ -0.85
HERC2-203ENST00000563670 NID2Q14112 1375 aa9.75□□□□□ -0.85
HERC2-203ENST00000563670 ZNF236Q9UL36 1845 aa9.75□□□□□ -0.85
HERC2-203ENST00000563670 COL4A4P53420 1690 aaPredicted RBP9.75□□□□□ -0.85
HERC2-203ENST00000563670 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms