RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 CASKIN2Q8WXE0 1202 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 LBHD1Q9BQE6 289 aaPredicted RBP13.96□□□□□ -0.17
CCDC187-201ENST00000563590 MLXIPLQ9NP71 852 aa13.96□□□□□ -0.17
CCDC187-201ENST00000563590 DNM1LO00429 736 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 KRT18P05783 430 aaKnown RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 FCER1AP12319 257 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 CCNHP51946 323 aaPredicted RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 TRIM28Q13263 835 aaKnown RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 GNPTABQ3T906 1256 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 INTS5Q6P9B9 1019 aaKnown RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 ZNF662Q6ZS27 426 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 BARGINQ6ZT62 677 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 KRT27Q7Z3Y8 459 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 NOD2Q9HC29 1040 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 SLURP2P0DP57 97 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 SOGA3Q5TF21 947 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 KIF2BQ8N4N8 673 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 THAP9Q9H5L6 903 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 TRPM3Q9HCF6 1732 aaPredicted RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 TXKP42681 527 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 RCAN1P53805 252 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 SKOR1P84550 965 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 DHX9Q08211 1270 aaKnown RBP13.95□□□□□ -0.18
CCDC187-201ENST00000563590 TCP10Q12799 353 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 LLGL1Q15334 1064 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 CCDC197Q8NCU1 140 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 ARMC2Q8NEN0 867 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 SH2D4AQ9H788 454 aa13.95□□□□□ -0.18
CCDC187-201ENST00000563590 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 RAD51CO43502 376 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 RPS6KA1Q15418 735 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 SPRED3Q2MJR0 410 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 ANKRD40Q6AI12 368 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 TTI2Q6NXR4 508 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 TBC1D5Q92609 795 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 GJA10Q969M2 543 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 LRRC45Q96CN5 670 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 PAIP2Q9BPZ3 127 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 TMX4Q9H1E5 349 aaPredicted RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 ADAMTS1Q9UHI8 967 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 FBXL5Q9UKA1 691 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 HIBADHP31937 336 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 NAPAP54920 295 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 POLR2FP61218 127 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 CACNB1Q02641 598 aaPredicted RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 ZKSCAN8Q15776 578 aaPredicted RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 PARP10Q53GL7 1025 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 CRNKL1Q9BZJ0 848 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 GOLGA6L10A0A0M3HER8 536 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 BICDL2A1A5D9 508 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 KRIT1O00522 736 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 GNAT2P19087 354 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 PCK1P35558 622 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 TNNI2P48788 182 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 NAALADL2Q58DX5 795 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 RNF217Q8TC41 542 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 MTMR8Q96EF0 704 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 DUSP9Q99956 384 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 PYM1Q9BRP8 204 aaKnown RBP13.94□□□□□ -0.18
CCDC187-201ENST00000563590 DISC1Q9NRI5 854 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 LEMD3Q9Y2U8 911 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 BCL9O00512 1426 aa13.94□□□□□ -0.18
CCDC187-201ENST00000563590 FAM196BA6NMK8 535 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 KRT13P13646 458 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 TCERG1LQ5VWI1 586 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 TBC1D9BQ66K14 1250 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 CAPRIN2Q6IMN6 1127 aaKnown RBP13.93□□□□□ -0.18
CCDC187-201ENST00000563590 P2RX5Q93086 422 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 SAAL1Q96ER3 474 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 SPAG5Q96R06 1193 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 BIN2Q9UBW5 565 aaPredicted RBP13.93□□□□□ -0.18
CCDC187-201ENST00000563590 TRAF5O00463 557 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 EPB41P11171 864 aaKnown RBP13.93□□□□□ -0.18
CCDC187-201ENST00000563590 SCNN1DP51172 638 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 CRYMQ14894 314 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 NELFCDQ8IXH7 590 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 SRBD1Q8N5C6 995 aaKnown RBP13.93□□□□□ -0.18
CCDC187-201ENST00000563590 RAPGEF5Q92565 580 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 OSBPL7Q9BZF2 842 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 KCNK9Q9NPC2 374 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 ARHGAP20Q9P2F6 1191 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 ALS2Q96Q42 1657 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 DAPK3O43293 454 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 KLRC4O43908 158 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 PPP2R2AP63151 447 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 KCNB1Q14721 858 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 ANKRD20A8PQ5CZ79 823 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 TMTC3Q6ZXV5 915 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 TXNRD3Q86VQ6 643 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
CCDC187-201ENST00000563590 RPGRQ92834 1020 aaKnown RBP13.93□□□□□ -0.18
CCDC187-201ENST00000563590 AP1G2O75843 785 aa13.92□□□□□ -0.18
CCDC187-201ENST00000563590 FGFR2P21802 821 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms