RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 FAM20AQ96MK3 541 aa21.18■□□□□ 0.98
FANCA-212ENST00000563513 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.18■□□□□ 0.982e-7■■■□□ 16.8
FANCA-212ENST00000563513 DDX20Q9UHI6 824 aaKnown RBP21.18■□□□□ 0.98
FANCA-212ENST00000563513 NKRFO15226 690 aaKnown RBP eCLIP21.17■□□□□ 0.98
FANCA-212ENST00000563513 FARP2O94887 1054 aaPredicted RBP21.17■□□□□ 0.98
FANCA-212ENST00000563513 NASPP49321 788 aaPredicted RBP21.17■□□□□ 0.98
FANCA-212ENST00000563513 IRX5P78411 483 aaPredicted RBP21.17■□□□□ 0.98
FANCA-212ENST00000563513 ATP2C1P98194 919 aaPredicted RBP21.17■□□□□ 0.98
FANCA-212ENST00000563513 IL17AQ16552 155 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 B3GNT9Q6UX72 402 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 ZNF396Q96N95 335 aaPredicted RBP21.17■□□□□ 0.98
FANCA-212ENST00000563513 RIT2Q99578 217 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 POLR3EQ9NVU0 708 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 Q9Y3F1 56 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 NFASCO94856 1347 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 MYH15Q9Y2K3 1946 aa21.17■□□□□ 0.98
FANCA-212ENST00000563513 CTAGE5O15320 804 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 DYNC1LI2O43237 492 aaPredicted RBP21.16■□□□□ 0.98
FANCA-212ENST00000563513 OR52Z1P0C646 297 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 NKX3-2P78367 333 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 ATL3Q6DD88 541 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 METTL7BQ6UX53 244 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 EMID1Q96A84 441 aaPredicted RBP21.16■□□□□ 0.98
FANCA-212ENST00000563513 TBC1D22BQ9NU19 505 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 VAV3Q9UKW4 847 aa21.16■□□□□ 0.98
FANCA-212ENST00000563513 DOCK5Q9H7D0 1870 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 CCNE2O96020 404 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 GH1P01241 217 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 RARBP10826 455 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 TXKP42681 527 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 LAMC2Q13753 1193 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 SLC39A14Q15043 492 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 LRCH2Q5VUJ6 765 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 DHX37Q8IY37 1157 aaKnown RBP21.15■□□□□ 0.98
FANCA-212ENST00000563513 SLFN12Q8IYM2 578 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 LINC00301Q8NCQ3 95 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 GIMAP8Q8ND71 665 aaPredicted RBP21.15■□□□□ 0.98
FANCA-212ENST00000563513 RNF208Q9H0X6 261 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 UPF3AQ9H1J1 476 aaKnown RBP21.15■□□□□ 0.98
FANCA-212ENST00000563513 ATP6V1DQ9Y5K8 247 aa21.15■□□□□ 0.98
FANCA-212ENST00000563513 DDX39AO00148 427 aaKnown RBP21.14■□□□□ 0.97
FANCA-212ENST00000563513 LAD1O00515 517 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 ADAMTS4O75173 837 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 BAG4O95429 457 aaKnown RBP21.14■□□□□ 0.97
FANCA-212ENST00000563513 GJA9P57773 515 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 SPIRE1Q08AE8 756 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 HSDL1Q3SXM5 330 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 TLK2Q86UE8 772 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 OR6J1Q8NGC5 347 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 TNPO1Q92973 898 aaKnown RBP21.14■□□□□ 0.97
FANCA-212ENST00000563513 SDF4Q9BRK5 362 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 TTC12Q9H892 705 aaPredicted RBP21.14■□□□□ 0.97
FANCA-212ENST00000563513 MLXIPQ9HAP2 919 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 SLC9A2Q9UBY0 812 aa21.14■□□□□ 0.97
FANCA-212ENST00000563513 MORC2Q9Y6X9 1032 aaPredicted RBP21.14■□□□□ 0.97
FANCA-212ENST00000563513 SYNRGQ9UMZ2 1314 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 GSTTP1A0A1W2PQM5 241 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 MYADML2A6NDP7 307 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 MSCO60682 206 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 GAS7O60861 476 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 BMP15O95972 392 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 PGK1P00558 417 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 PRPHP41219 470 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 KLHDC9Q8NEP7 349 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 AFG1LQ8WV93 481 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 DEFB118Q96PH6 123 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 TEKT3Q9BXF9 490 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 UNC45AQ9H3U1 944 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 JPH1Q9HDC5 661 aaPredicted RBP21.13■□□□□ 0.97
FANCA-212ENST00000563513 RCOR1Q9UKL0 485 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 PCDHA12Q9UN75 941 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 CEP131Q9UPN4 1083 aa21.13■□□□□ 0.97
FANCA-212ENST00000563513 A6NJR5 290 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 MARCH6O60337 910 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 ATG7O95352 703 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 YEATS4O95619 227 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 MARCKSP29966 332 aaPredicted RBP21.12■□□□□ 0.97
FANCA-212ENST00000563513 PPP2R5CQ13362 524 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 ARL6IP4Q66PJ3 421 aaKnown RBP21.12■□□□□ 0.97
FANCA-212ENST00000563513 SPATA33Q96N06 139 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 GPR20Q99678 358 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 XPNPEP3Q9NQH7 507 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 CFAP45Q9UL16 551 aa21.12■□□□□ 0.97
FANCA-212ENST00000563513 EML1O00423 815 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 GJB1P08034 283 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 HOXD8P13378 290 aaPredicted RBP21.11■□□□□ 0.97
FANCA-212ENST00000563513 TECP42680 631 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 FXR2P51116 673 aaKnown RBP eCLIP21.11■□□□□ 0.97
FANCA-212ENST00000563513 ACTR2P61160 394 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 KRT85P78386 507 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 BEX3Q00994 111 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 SP4Q02446 784 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 GRIN1Q05586 938 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 CCSAPQ6IQ19 270 aaPredicted RBP21.11■□□□□ 0.97
FANCA-212ENST00000563513 ZNF746Q6NUN9 644 aaPredicted RBP21.11■□□□□ 0.97
FANCA-212ENST00000563513 PPTC7Q8NI37 304 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 CRISPLD2Q9H0B8 497 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 AP5M1Q9H0R1 490 aa21.11■□□□□ 0.97
FANCA-212ENST00000563513 FBXO2Q9UK22 296 aaPredicted RBP21.11■□□□□ 0.97
FANCA-212ENST00000563513 OGDHLQ9ULD0 1010 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms