RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 REM2Q8IYK8 340 aaPredicted RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 MORC4Q8TE76 937 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 SNX29Q8TEQ0 813 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 PLIN2Q99541 437 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 SDF4Q9BRK5 362 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 UNC45AQ9H3U1 944 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 SLC15A5A6NIM6 579 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 SPATA31C2B4DYI2 1134 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 PLCG1P19174 1290 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 ICAM3P32942 547 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 VEGFBP49765 207 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 ZRSR1Q15695 479 aaKnown RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 RRAGBQ5VZM2 374 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 SH3RF1Q7Z6J0 888 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 IQUBQ8NA54 791 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 CALML4Q96GE6 196 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 PYM1Q9BRP8 204 aaKnown RBP11.43□□□□□ -0.58
SMG1-208ENST00000563448 USP25Q9UHP3 1055 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 CASP8AP2Q9UKL3 1982 aa11.43□□□□□ -0.58
SMG1-208ENST00000563448 LOC102724159A0A0B4J2E5 919 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 B4DLN1 442 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 DDX39AO00148 427 aaKnown RBP11.42□□□□□ -0.58
SMG1-208ENST00000563448 MED24O75448 989 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 SLFN14P0C7P3 912 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 KCNA2P16389 499 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 STAT6P42226 847 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 PNOCQ13519 176 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 PWP2Q15269 919 aaKnown RBP11.42□□□□□ -0.58
SMG1-208ENST00000563448 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 TMEM119Q4V9L6 283 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 HYIQ5T013 277 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 MORN1Q5T089 497 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 LRSAM1Q6UWE0 723 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 RASSF8Q8NHQ8 419 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
SMG1-208ENST00000563448 TBC1D22BQ9NU19 505 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 SLC26A4O43511 780 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 CHMP2AO43633 222 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 PRR29P0C7W0 189 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 SPATA31C1P0DKV0 1188 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 CTGFP29279 349 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 CCT6AP40227 531 aaKnown RBP11.42□□□□□ -0.58
SMG1-208ENST00000563448 KANK3Q6NY19 840 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 EEPD1Q7L9B9 569 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 DPP9Q86TI2 863 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 CEP57L1Q8IYX8 460 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 NPLOC4Q8TAT6 608 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 PAGE5Q96GU1 130 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 CDHR1Q96JP9 859 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 MTRQ99707 1265 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 EIF2AK1Q9BQI3 630 aaKnown RBP11.42□□□□□ -0.58
SMG1-208ENST00000563448 FUCA2Q9BTY2 467 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 BLOC1S4Q9NUP1 217 aa11.42□□□□□ -0.58
SMG1-208ENST00000563448 ASB14A6NK59 587 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 RPA1P27694 616 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 MAP2K2P36507 400 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 AFMP43652 599 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 SP2Q02086 613 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 ARMCX2Q7L311 632 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 KCNK18Q7Z418 384 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
SMG1-208ENST00000563448 GAS2L3Q86XJ1 694 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 CATSPER3Q86XQ3 398 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 ERMNQ8TAM6 284 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 STAMQ92783 540 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 MAML3Q96JK9 1138 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 POLR3CQ9BUI4 534 aaPredicted RBP11.41□□□□□ -0.58
SMG1-208ENST00000563448 KIAA1468Q9P260 1216 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
SMG1-208ENST00000563448 STK24Q9Y6E0 443 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 KDM3AQ9Y4C1 1321 aa11.41□□□□□ -0.58
SMG1-208ENST00000563448 POTEB3A0JP26 581 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 TBC1D8O95759 1140 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 MAP2K5Q13163 448 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 POSTNQ15063 836 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 EPHA7Q15375 998 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 HAUS3Q68CZ6 603 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 POTEBQ6S5H4 581 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 MAMDC4Q6UXC1 1216 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 MIER3Q7Z3K6 550 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 USP6NLQ92738 828 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 DYDC2Q96IM9 177 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 HSD17B14Q9BPX1 270 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 NT5C3AQ9H0P0 336 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 RGL1Q9NZL6 768 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 NFASCO94856 1347 aa11.4□□□□□ -0.58
SMG1-208ENST00000563448 E9PMD0 336 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 SLITRK3O94933 977 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 CCNE2O96020 404 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 CASP1P29466 404 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 CYP4A11Q02928 519 aa11.4□□□□□ -0.59
SMG1-208ENST00000563448 FBXO16Q8IX29 292 aaPredicted RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms