RNA–Protein interactions for RNA: ENST00000563293.1

RPAP1-205, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-205ENST00000563293 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
RPAP1-205ENST00000563293 CXCL10P02778 98 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 CALML3P27482 149 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 KIF5BP33176 963 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 METAP2P50579 478 aaKnown RBP eCLIP10.88□□□□□ -0.67
RPAP1-205ENST00000563293 APOBRQ0VD83 1088 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 MBTPS1Q14703 1052 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 ME3Q16798 604 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 APOA5Q6Q788 366 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 ZNF654Q8IZM8 581 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 RGS22Q8NE09 1264 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 NEK9Q8TD19 979 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 SNX27Q96L92 541 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 TGS1Q96RS0 853 aaKnown RBP10.88□□□□□ -0.67
RPAP1-205ENST00000563293 RAD9AQ99638 391 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 ZKSCAN3Q9BRR0 538 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 RANBP17Q9H2T7 1088 aaKnown RBP10.88□□□□□ -0.67
RPAP1-205ENST00000563293 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 KIF3AQ9Y496 699 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 NID2Q14112 1375 aa10.88□□□□□ -0.67
RPAP1-205ENST00000563293 CPLX1O14810 134 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 TXNP10599 105 aaKnown RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 CKBP12277 381 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 SELPP16109 830 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 EDNRBP24530 442 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 SMARCA1P28370 1054 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 HMGN5P82970 282 aaKnown RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 ZNF200P98182 395 aaPredicted RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 PTPN11Q06124 597 aaPredicted RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 TROAPQ12815 778 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 HIC1Q14526 733 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 CNKSR3Q6P9H4 555 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 HFE2Q6ZVN8 426 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 LRRC8DQ7L1W4 858 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 FANCBQ8NB91 859 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 AFAP1L1Q8TED9 768 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 GTF3C6Q969F1 213 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 OSBPL7Q9BZF2 842 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 ADD3Q9UEY8 706 aaKnown RBP10.87□□□□□ -0.67
RPAP1-205ENST00000563293 NOD1Q9Y239 953 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 TECTAO75443 2155 aa10.87□□□□□ -0.67
RPAP1-205ENST00000563293 FRMPD2Q68DX3 1309 aaPredicted RBP10.86□□□□□ -0.67
RPAP1-205ENST00000563293 ATG2AQ2TAZ0 1938 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 GOLGA8BA8MQT2 603 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 ALADP13716 330 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 RPS6P62753 249 aaKnown RBP10.86□□□□□ -0.67
RPAP1-205ENST00000563293 PDE4DQ08499 809 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 COL9A3Q14050 684 aaPredicted RBP10.86□□□□□ -0.67
RPAP1-205ENST00000563293 RTN1Q16799 776 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 LY6KQ17RY6 165 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 TRIM71Q2Q1W2 868 aaKnown RBP10.86□□□□□ -0.67
RPAP1-205ENST00000563293 CCDC62Q6P9F0 684 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 RNF207Q6ZRF8 634 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 DCAF4Q8WV16 495 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 TBC1D5Q92609 795 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 GPCPD1Q9NPB8 672 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 HDAC6Q9UBN7 1215 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 BRPF3Q9ULD4 1205 aa10.86□□□□□ -0.67
RPAP1-205ENST00000563293 NAP1L2Q9ULW6 460 aaPredicted RBP10.86□□□□□ -0.67
RPAP1-205ENST00000563293 MICAL3Q7RTP6 2002 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 GOLGA8AA7E2F4 631 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 DCXO43602 365 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 KPNA6O60684 536 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 MMP3P08254 477 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 PARP1P09874 1014 aaKnown RBP10.85□□□□□ -0.67
RPAP1-205ENST00000563293 LTBRP36941 435 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 ZP2Q05996 745 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 ARHGAP1Q07960 439 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 SCRN1Q12765 414 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
RPAP1-205ENST00000563293 GRM4Q14833 912 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 CSPP1Q1MSJ5 1256 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 CCDC96Q2M329 555 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 GPATCH4Q5T3I0 446 aaKnown RBP10.85□□□□□ -0.67
RPAP1-205ENST00000563293 ZNF618Q5T7W0 954 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 BTNL9Q6UXG8 535 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 MICU3Q86XE3 530 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 FBXO22Q8NEZ5 403 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 CAGE1Q8TC20 777 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 SCFD2Q8WU76 684 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 WASF1Q92558 559 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 SMC3Q9UQE7 1217 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 MYH7BA7E2Y1 1941 aa10.85□□□□□ -0.67
RPAP1-205ENST00000563293 ABHD14A-ACY1A0A1B0GW23 586 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 C19orf67A6NJJ6 358 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 NKRFO15226 690 aaKnown RBP eCLIP10.84□□□□□ -0.67
RPAP1-205ENST00000563293 LGR5O75473 907 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 SNHG28P0DPA3 235 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 IFNAR1P17181 557 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 PDCP20941 246 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 RBL2Q08999 1139 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 EPC2Q52LR7 807 aa10.84□□□□□ -0.67
RPAP1-205ENST00000563293 BRDTQ58F21 947 aaPredicted RBP10.84□□□□□ -0.67
RPAP1-205ENST00000563293 TCEAL5Q5H9L2 206 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms