RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 SLC27A2O14975 620 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 MPOP05164 745 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 YBX1P67809 324 aaKnown RBP7.91□□□□□ -1.14
LINC00557-201ENST00000563184 NR1I3Q14994 352 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 RAB3GAP1Q15042 981 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 DHCR24Q15392 516 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 CT47A1Q5JQC4 288 aaPredicted RBP7.91□□□□□ -1.14
LINC00557-201ENST00000563184 CYP4F22Q6NT55 531 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 IRF2BP1Q8IU81 584 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 RBM12BQ8IXT5 1001 aaKnown RBP7.91□□□□□ -1.14
LINC00557-201ENST00000563184 C2orf69Q8N8R5 385 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 PEX11GQ96HA9 241 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 SMOC1Q9H4F8 434 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 DSEQ9UL01 958 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 PALD1Q9ULE6 856 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 SRPK3Q9UPE1 567 aa7.91□□□□□ -1.14
LINC00557-201ENST00000563184 NOP58Q9Y2X3 529 aaKnown RBP7.91□□□□□ -1.14
LINC00557-201ENST00000563184 TCRBV5S2A0A599 114 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PTPDC1A2A3K4 754 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 OR14I1A6ND48 311 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 KRIT1O00522 736 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 ZBTB48P10074 688 aaPredicted RBP7.9□□□□□ -1.14
LINC00557-201ENST00000563184 BPIP17213 487 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PDE6BP35913 854 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 MAPKAPK2P49137 400 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PRR5P85299 388 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 NFKB2Q00653 900 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 STRN3Q13033 797 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PLEKHN1Q494U1 663 aaPredicted RBP7.9□□□□□ -1.14
LINC00557-201ENST00000563184 DDX42Q86XP3 938 aaKnown RBP eCLIP7.9□□□□□ -1.14
LINC00557-201ENST00000563184 NOSTRINQ8IVI9 506 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 RPUSD2Q8IZ73 545 aaKnown RBP7.9□□□□□ -1.14
LINC00557-201ENST00000563184 FAM168AQ92567 244 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PUS7Q96PZ0 661 aaKnown RBP7.9□□□□□ -1.14
LINC00557-201ENST00000563184 CABP5Q9NP86 173 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 MYOTQ9UBF9 498 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 ASH2LQ9UBL3 628 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 NUDT5Q9UKK9 219 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 ATP8A1Q9Y2Q0 1164 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 PCDHB4Q9Y5E5 795 aa7.9□□□□□ -1.14
LINC00557-201ENST00000563184 LTFP02788 710 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 ATP2A2P16615 1042 aaKnown RBP7.89□□□□□ -1.15
LINC00557-201ENST00000563184 EPHA5P54756 1037 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 FIGNQ5HY92 759 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 KCTD1Q719H9 257 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 SMC1BQ8NDV3 1235 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 OR2W6PQ8NHA6 318 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 PHOSPHO1Q8TCT1 267 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 TSPAN17Q96FV3 270 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 LIN37Q96GY3 246 aaPredicted RBP7.89□□□□□ -1.15
LINC00557-201ENST00000563184 AP5M1Q9H0R1 490 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 BCAS3Q9H6U6 928 aa7.89□□□□□ -1.15
LINC00557-201ENST00000563184 hCG_2014768A0A024R1R8 64 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 SLC12A8A0AV02 714 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 IBSPP21815 317 aaPredicted RBP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 ADCYAP1R1P41586 468 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 CDKN1CP49918 316 aaPredicted RBP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 SCNN1BP51168 640 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 TUSC3Q13454 348 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 SEC23AQ15436 765 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 ARHGAP44Q17R89 818 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 LHFPL2Q6ZUX7 228 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 MILR1Q7Z6M3 343 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 ARRDC4Q8NCT1 418 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 CLEC4DQ8WXI8 215 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 BOCQ9BWV1 1114 aa7.88□□□□□ -1.15
LINC00557-201ENST00000563184 ZNF552Q9H707 407 aaPredicted RBP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.88□□□□□ -1.15
LINC00557-201ENST00000563184 DVL2O14641 736 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 MAFKO60675 156 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 ID4P47928 161 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 CPZQ66K79 652 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 CHTF18Q8WVB6 975 aa7.87□□□□□ -1.15
LINC00557-201ENST00000563184 PDGFDQ9GZP0 370 aaPredicted RBP7.87□□□□□ -1.15
LINC00557-201ENST00000563184 THG1LQ9NWX6 298 aaKnown RBP7.87□□□□□ -1.15
LINC00557-201ENST00000563184 H2AFY2Q9P0M6 372 aaPredicted RBP7.87□□□□□ -1.15
LINC00557-201ENST00000563184 DBR1Q9UK59 544 aaKnown RBP7.87□□□□□ -1.15
LINC00557-201ENST00000563184 FAM90A27PA6NNH2 459 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 NEMP1O14524 444 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 GAS7O60861 476 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 CLASP2O75122 1294 aaKnown RBP7.86□□□□□ -1.15
LINC00557-201ENST00000563184 KRT37O76014 449 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 ZBTB7AO95365 584 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 VIPR1P32241 457 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 IGBP1P78318 339 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 IRF9Q00978 393 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 SLC9A5Q14940 896 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 ZC3H14Q6PJT7 736 aaKnown RBP7.86□□□□□ -1.15
LINC00557-201ENST00000563184 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.86□□□□□ -1.15
LINC00557-201ENST00000563184 NLGN4XQ8N0W4 816 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 PRPF38AQ8NAV1 312 aaKnown RBP7.86□□□□□ -1.15
LINC00557-201ENST00000563184 DLG3Q92796 817 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 USP7Q93009 1102 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 OXSMQ9NWU1 459 aa7.86□□□□□ -1.15
LINC00557-201ENST00000563184 ZKSCAN5Q9Y2L8 839 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms