RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 RING1Q06587 406 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 SMAD4Q13485 552 aaKnown RBP7.55□□□□□ -1.2
TCF4-213ENST00000562543 LRP8Q14114 963 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 TIGD5Q53EQ6 642 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 RPUSD2Q8IZ73 545 aaKnown RBP7.55□□□□□ -1.2
TCF4-213ENST00000562543 CYP2W1Q8TAV3 490 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 HAUS7Q99871 368 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 WNT8AQ9H1J5 351 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 HIPK3Q9H422 1215 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 RFX7Q2KHR2 1363 aa7.55□□□□□ -1.2
TCF4-213ENST00000562543 ELP1O95163 1332 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 KIF28PB7ZC32 967 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 PMLP29590 882 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 CCL23P55773 120 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 ERVK-21P61565 698 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 SHC2P98077 582 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 CHRNDQ07001 517 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 TCP10Q12799 353 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 SPP2Q13103 211 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 SOWAHCQ53LP3 525 aaPredicted RBP7.54□□□□□ -1.2
TCF4-213ENST00000562543 PPM1JQ5JR12 505 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 PERM1Q5SV97 790 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 STAG2Q8N3U4 1231 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 TTLL11Q8NHH1 800 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 GTF3C2Q8WUA4 911 aaPredicted RBP7.54□□□□□ -1.2
TCF4-213ENST00000562543 WFDC12Q8WWY7 111 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 MRPL38Q96DV4 380 aaKnown RBP7.54□□□□□ -1.2
TCF4-213ENST00000562543 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 LPIN3Q9BQK8 851 aa7.54□□□□□ -1.2
TCF4-213ENST00000562543 CWC22Q9HCG8 908 aaKnown RBP7.54□□□□□ -1.2
TCF4-213ENST00000562543 CNOT1A5YKK6 2376 aaKnown RBP7.53□□□□□ -1.2
TCF4-213ENST00000562543 TGFBR3LH3BV60 316 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 ARVCFO00192 962 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 TLR3O15455 904 aaKnown RBP7.53□□□□□ -1.2
TCF4-213ENST00000562543 SASH3O75995 380 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 PFKMP08237 780 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 NOS3P29474 1203 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 ICAM3P32942 547 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 IGHMBP2P38935 993 aaKnown RBP7.53□□□□□ -1.2
TCF4-213ENST00000562543 SEC13P55735 322 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 NFIAQ12857 509 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 CLUL1Q15846 466 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 RTN1Q16799 776 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 PTPN21Q16825 1174 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 PRAMEF19Q5SWL8 479 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 CCSAPQ6IQ19 270 aaPredicted RBP7.53□□□□□ -1.2
TCF4-213ENST00000562543 EP400NLQ6ZTU2 488 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 RPAINQ86UA6 219 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 PAGR1Q9BTK6 254 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 MRIQ9BWK5 157 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 CLDND1Q9NY35 253 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 MTUS1Q9ULD2 1270 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 USP20Q9Y2K6 914 aa7.53□□□□□ -1.2
TCF4-213ENST00000562543 TANC1Q9C0D5 1861 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 A0A0U1RQG5 324 aaPredicted RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 PRR5-ARHGAP8B1AHC4 643 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 CNMDO75829 334 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 PRKCSHP14314 528 aaPredicted RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 IDH3AP50213 366 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 ARHGAP8P85298 464 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 DLX2Q07687 328 aaPredicted RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 ANGPT1Q15389 498 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 CRTC2Q53ET0 693 aaPredicted RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 LCE3BQ5TA77 95 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 FBXO11Q86XK2 927 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 KLHDC9Q8NEP7 349 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 JARID2Q92833 1246 aaPredicted RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 IFT43Q96FT9 208 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 TGS1Q96RS0 853 aaKnown RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 NOC4LQ9BVI4 516 aaKnown RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 LRRFIP2Q9Y608 721 aaKnown RBP7.52□□□□□ -1.21
TCF4-213ENST00000562543 MYO7AQ13402 2215 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 DMXL2Q8TDJ6 3036 aa7.52□□□□□ -1.21
TCF4-213ENST00000562543 DEAF1O75398 565 aaPredicted RBP7.51□□□□□ -1.21
TCF4-213ENST00000562543 TAF5LO75529 589 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 DPYDQ12882 1025 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 IER5Q5VY09 327 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 ELMSAN1Q6PJG2 1045 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
TCF4-213ENST00000562543 ZGPATQ8N5A5 531 aaKnown RBP7.51□□□□□ -1.21
TCF4-213ENST00000562543 SCLYQ96I15 445 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 MEGF10Q96KG7 1140 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 GLT1D1Q96MS3 346 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 ANKFY1Q9P2R3 1169 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 CTNNA3Q9UI47 895 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 MAFBQ9Y5Q3 323 aaPredicted RBP7.51□□□□□ -1.21
TCF4-213ENST00000562543 IVNS1ABPQ9Y6Y0 642 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 R4GN57 208 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 SYNRGQ9UMZ2 1314 aa7.51□□□□□ -1.21
TCF4-213ENST00000562543 LINC01553A4QN01 128 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 ALX3O95076 343 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 CCNA1P78396 465 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 LMNB2Q03252 620 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 KCNA10Q16322 511 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 HIF1AQ16665 826 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 WDR78Q5VTH9 848 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 HHIPL2Q6UWX4 724 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 CCDC105Q8IYK2 499 aa7.5□□□□□ -1.21
TCF4-213ENST00000562543 CCDC191Q8NCU4 936 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms