RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 EVPLQ92817 2033 aa10.95□□□□□ -0.66
RABGGTA-221ENST00000561055 TCHHQ07283 1943 aa10.95□□□□□ -0.66
RABGGTA-221ENST00000561055 ELP1O95163 1332 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 DHX15O43143 795 aaKnown RBP10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 GGPS1O95749 300 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 ASGR1P07306 291 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 PDIA4P13667 645 aaKnown RBP10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 PDCP20941 246 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 PTGS1P23219 599 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 IRX5P78411 483 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 BEX3Q00994 111 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 GUCY1B3Q02153 619 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 SNX17Q15036 470 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 HSDL1Q3SXM5 330 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 BRDTQ58F21 947 aaPredicted RBP10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 PIK3AP1Q6ZUJ8 805 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 DIS3LQ8TF46 1054 aaKnown RBP10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 C11orf49Q9H6J7 331 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 BCAS3Q9H6U6 928 aa10.94□□□□□ -0.66
RABGGTA-221ENST00000561055 IPO5O00410 1097 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 TBX3O15119 743 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 ATG7O95352 703 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 MMP3P08254 477 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 PURAQ00577 322 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 ORC2Q13416 577 aaPredicted RBP10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 DGKDQ16760 1214 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 PRR16Q569H4 304 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 LARP1BQ659C4 914 aaKnown RBP10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 CYFIP1Q7L576 1253 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 NOSTRINQ8IVI9 506 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 AFG1LQ8WV93 481 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 GLT1D1Q96MS3 346 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 RIT2Q99578 217 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 MLXIPQ9HAP2 919 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 TBC1D22BQ9NU19 505 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 LOXHD1Q8IVV2 1947 aa10.93□□□□□ -0.66
RABGGTA-221ENST00000561055 A0A1W2PQ45 241 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 A0A1W2PQY0 241 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 HAS3O00219 553 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 MSH4O15457 936 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 TDP2O95551 362 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SYT1P21579 422 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 CDK7P50613 346 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 FOSBP53539 338 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 ITGB3BPQ13352 177 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 LETM2Q2VYF4 491 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 B3GNT9Q6UX72 402 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SLC39A5Q6ZMH5 540 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SLC43A3Q8NBI5 491 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 ETNPPLQ8TBG4 499 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SLC5A5Q92911 643 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 FAM20AQ96MK3 541 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SPATA33Q96N06 139 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 GPR20Q99678 358 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SDF4Q9BRK5 362 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 MTG1Q9BT17 334 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 HTATIP2Q9BUP3 242 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SENP6Q9GZR1 1112 aaPredicted RBP10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 KCNMB3Q9NPA1 279 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 SLC9A2Q9UBY0 812 aa10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 DDX25Q9UHL0 483 aaKnown RBP10.92□□□□□ -0.66
RABGGTA-221ENST00000561055 IGKV6D-21A0A0A0MT36 114 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 GSTTP1A0A1W2PQM5 241 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 KIF28PB7ZC32 967 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 H3BQV1 296 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 PSMD10O75832 226 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 ZNF746Q6NUN9 644 aaPredicted RBP10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 CXCL17Q6UXB2 119 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 SEPT1Q8WYJ6 367 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 KAT2BQ92831 832 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 ZNF577Q9BSK1 485 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 C16orf70Q9BSU1 422 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 JPH1Q9HDC5 661 aaPredicted RBP10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 STARD7Q9NQZ5 370 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 LTBP2Q14767 1821 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 ARID2Q68CP9 1835 aa10.91□□□□□ -0.66
RABGGTA-221ENST00000561055 GRIN2DO15399 1336 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 EMSYQ7Z589 1322 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 A0A0U1RQG5 324 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 ARVCFO00192 962 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 NOP56O00567 594 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 WNT7AO00755 349 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 SLC37A4O43826 429 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 CCNT1O60563 726 aaKnown RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 LGR5O75473 907 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 F2P00734 622 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 TOB1P50616 345 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 KRT76Q01546 638 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 PTPN11Q06124 597 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 NFRKBQ6P4R8 1299 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 ABHD15Q6UXT9 468 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 ANKRD33Q7Z3H0 272 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 BRAPQ7Z569 592 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 SESTD1Q86VW0 696 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 SMAP1Q8IYB5 467 aaPredicted RBP10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 SLFN12Q8IYM2 578 aa10.9□□□□□ -0.66
RABGGTA-221ENST00000561055 RDM1Q8NG50 284 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms