RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 MAGEC3Q8TD91 643 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 LUC7LQ9NQ29 371 aaKnown RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 AMACRQ9UHK6 382 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 L3MBTL1Q9Y468 752 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 PPP1R12AO14974 1030 aaPredicted RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 CTNND1O60716 968 aaKnown RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 SERPING1P05155 500 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 CUL1Q13616 776 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 PROSER2Q86WR7 435 aaPredicted RBP18.09■□□□□ 0.49
TPM1-228ENST00000560975 FAM133AQ8N9E0 248 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 TMOD3Q9NYL9 352 aa18.09■□□□□ 0.49
TPM1-228ENST00000560975 TRPM3Q9HCF6 1732 aaPredicted RBP18.08■□□□□ 0.49
TPM1-228ENST00000560975 ORC4O43929 436 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 TRIM37O94972 964 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 CDC25CP30307 473 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 GYG1P46976 350 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 AMPD3Q01432 767 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 TBC1D1Q86TI0 1168 aaPredicted RBP18.08■□□□□ 0.48
TPM1-228ENST00000560975 NSMCE1Q8WV22 266 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 RSRC1Q96IZ7 334 aaKnown RBP18.08■□□□□ 0.48
TPM1-228ENST00000560975 CUEDC2Q9H467 287 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 PCDHGC5Q9Y5F6 944 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 RTN2O75298 545 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 STARD3NLO95772 234 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 OR52Z1P0C646 297 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 ITGA4P13612 1032 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 DHX9Q08211 1270 aaKnown RBP18.08■□□□□ 0.48
TPM1-228ENST00000560975 CUL5Q93034 780 aa18.08■□□□□ 0.48
TPM1-228ENST00000560975 DOCK2Q92608 1830 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 MYMKA6NI61 221 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 CCT8L1PA6NM43 557 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 RBAK-RBAKDNI3L0D1 243 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 DNAJC8O75937 253 aaPredicted RBP18.07■□□□□ 0.48
TPM1-228ENST00000560975 NOL4O94818 638 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 KIF5BP33176 963 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 FAM133BQ5BKY9 247 aaKnown RBP18.07■□□□□ 0.48
TPM1-228ENST00000560975 CCDC197Q8NCU1 140 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 CHMP6Q96FZ7 201 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 CELF4Q9BZC1 486 aaKnown RBP18.07■□□□□ 0.48
TPM1-228ENST00000560975 KDM4CQ9H3R0 1056 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 TMEM59LQ9UK28 342 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 PNMA2Q9UL42 364 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 ATP6V0A2Q9Y487 856 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 PPIP5K2O43314 1243 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 PDE6BP35913 854 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 PPP1R2P41236 205 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 CCNHP51946 323 aaPredicted RBP18.07■□□□□ 0.48
TPM1-228ENST00000560975 AGBL2Q5U5Z8 902 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 CCDC63Q8NA47 563 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 ANKS1AQ92625 1134 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 PSMD1Q99460 953 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 SELENOSQ9BQE4 189 aa18.07■□□□□ 0.48
TPM1-228ENST00000560975 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.07■□□□□ 0.48
TPM1-228ENST00000560975 SMIM23A6NLE4 172 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 KLHL30Q0D2K2 578 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 SLC18A3Q16572 532 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 SV2BQ7L1I2 683 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 XPO6Q96QU8 1125 aaKnown RBP18.06■□□□□ 0.48
TPM1-228ENST00000560975 CPVLQ9H3G5 476 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 CEP72Q9P209 647 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 ATP8A1Q9Y2Q0 1164 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 M0R2N6 131 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 KRIT1O00522 736 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 TTI1O43156 1089 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 KIF4AO95239 1232 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 LRRC55Q6ZSA7 311 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 MAGEF1Q9HAY2 307 aa18.06■□□□□ 0.48
TPM1-228ENST00000560975 FAM170AA1A519 330 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 FGFR1OPO95684 399 aaKnown RBP18.05■□□□□ 0.48
TPM1-228ENST00000560975 TXKP42681 527 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 SEMA3FQ13275 785 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 SCFD2Q8WU76 684 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 CALML4Q96GE6 196 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 MMTAG2Q9BU76 263 aaKnown RBP18.05■□□□□ 0.48
TPM1-228ENST00000560975 GGT7Q9UJ14 662 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 NOC2LQ9Y3T9 749 aaKnown RBP18.05■□□□□ 0.48
TPM1-228ENST00000560975 TLDC2A0PJX2 215 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 TRAF5O00463 557 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 CAND2O75155 1236 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 PAEPP09466 180 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 TMC3Q7Z5M5 1100 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 TBC1D22AQ8WUA7 517 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 BRIP1Q9BX63 1249 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 MYH7BA7E2Y1 1941 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 UBR2Q8IWV8 1755 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 MTMR3Q13615 1198 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 NBPF9Q3BBW0 867 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 RCSD1Q6JBY9 416 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 TMED8Q6PL24 325 aaPredicted RBP18.05■□□□□ 0.48
TPM1-228ENST00000560975 ARMC9Q7Z3E5 817 aa18.05■□□□□ 0.48
TPM1-228ENST00000560975 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.05■□□□□ 0.48
TPM1-228ENST00000560975 GHRP10912 638 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 GCKP35557 465 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 PEX19P40855 299 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 SWAP70Q9UH65 585 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 ZBTB1Q9Y2K1 713 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 ALS2Q96Q42 1657 aa18.04■□□□□ 0.48
TPM1-228ENST00000560975 F8VZ95 297 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms