RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 MRIQ9BWK5 157 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 FBXL7Q9UJT9 491 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 PTCH2Q9Y6C5 1203 aa6.69□□□□□ -1.34
PSMA4-221ENST00000560842 H7BY64 318 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 CYR61O00622 381 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 KCNQ2O43526 872 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 MSCO60682 206 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 SLPIP03973 132 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 TACR2P21452 398 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 TACR1P25103 407 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 TRIM61Q5EBN2 209 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 LBX2Q6XYB7 198 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 TTLL7Q6ZT98 887 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 USP53Q70EK8 1073 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 MAMDC2Q7Z304 686 aaPredicted RBP6.68□□□□□ -1.34
PSMA4-221ENST00000560842 NOP9Q86U38 636 aaKnown RBP6.68□□□□□ -1.34
PSMA4-221ENST00000560842 Q8N1X5 172 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 PTPRN2Q92932 1015 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 RNPC3Q96LT9 517 aaKnown RBP6.68□□□□□ -1.34
PSMA4-221ENST00000560842 NOX5Q96PH1 765 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 PHF20Q9BVI0 1012 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 TMEM260Q9NX78 707 aa6.68□□□□□ -1.34
PSMA4-221ENST00000560842 ASXL2Q76L83 1435 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 BLACEA4D250 179 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 MYO1BO43795 1136 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 PMLP29590 882 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 ACVRL1P37023 503 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 BCL6P41182 706 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 GPR85P60893 370 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 GABREP78334 506 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 KCNT2Q6UVM3 1135 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 CHST13Q8NET6 341 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 SMARCC2Q8TAQ2 1214 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.67□□□□□ -1.34
PSMA4-221ENST00000560842 ADAMTS17Q8TE56 1095 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 SH3TC2Q8TF17 1288 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 CPA5Q8WXQ8 436 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 TSPAN17Q96FV3 270 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 SSBP3Q9BWW4 388 aaPredicted RBP6.67□□□□□ -1.34
PSMA4-221ENST00000560842 KANSL2Q9H9L4 492 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 PCDHA2Q9Y5H9 948 aa6.67□□□□□ -1.34
PSMA4-221ENST00000560842 C22orf46C9J442 243 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 FUCA1P04066 466 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 SLC6A11P48066 632 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 MROH9Q5TGP6 573 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 WWC2Q6AWC2 1192 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 IFNL3Q8IZI9 196 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 GSTCDQ8NEC7 633 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 IPO9Q96P70 1041 aaKnown RBP6.66□□□□□ -1.34
PSMA4-221ENST00000560842 MRPL4Q9BYD3 311 aaKnown RBP6.66□□□□□ -1.34
PSMA4-221ENST00000560842 MARCH2Q9P0N8 246 aa6.66□□□□□ -1.34
PSMA4-221ENST00000560842 WNT9AO14904 365 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 IGSF3O75054 1194 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 CEP68Q76N32 757 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 CABP7Q86V35 215 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 TEX2Q8IWB9 1127 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 SH3RF3Q8TEJ3 882 aaPredicted RBP6.65□□□□□ -1.34
PSMA4-221ENST00000560842 TMEM169Q96HH4 297 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 SLITRK6Q9H5Y7 841 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 BCAS3Q9H6U6 928 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 RXFP1Q9HBX9 757 aa6.65□□□□□ -1.34
PSMA4-221ENST00000560842 AQP7O14520 342 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 ZBTB7AO95365 584 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 NTRK1P04629 796 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 FPR2P25090 351 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 CACNB2Q08289 660 aaPredicted RBP6.64□□□□□ -1.35
PSMA4-221ENST00000560842 KIAA2012Q0VF49 1180 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 SLC9A5Q14940 896 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 KIZQ2M2Z5 673 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 EMC4Q5J8M3 183 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 CRIP3Q6Q6R5 217 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 LINC00482Q8N8I6 264 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 ZBTB8AQ96BR9 441 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 TRMT2BQ96GJ1 504 aaKnown RBP6.64□□□□□ -1.35
PSMA4-221ENST00000560842 PEX11GQ96HA9 241 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 NCOA5Q9HCD5 579 aaKnown RBP6.64□□□□□ -1.35
PSMA4-221ENST00000560842 TBX22Q9Y458 520 aa6.64□□□□□ -1.35
PSMA4-221ENST00000560842 PLD2O14939 933 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 EFCAB14O75071 495 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 HABP4Q5JVS0 413 aaKnown RBP6.63□□□□□ -1.35
PSMA4-221ENST00000560842 JAZF1Q86VZ6 243 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 ZFPM1Q8IX07 1006 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 LGI4Q8N135 537 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 SYNPOQ8N3V7 929 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 USP33Q8TEY7 942 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 SEC14L1Q92503 715 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 ST6GALNAC2Q9UJ37 374 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 NUDT5Q9UKK9 219 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 INVSQ9Y283 1065 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 TSC22D4Q9Y3Q8 395 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 TRAF6Q9Y4K3 522 aa6.63□□□□□ -1.35
PSMA4-221ENST00000560842 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.62□□□□□ -1.35
PSMA4-221ENST00000560842 ARVCFO00192 962 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 SGSM2O43147 1006 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 TADA3O75528 432 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 RFPL3O75679 317 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 NAT1P18440 290 aa6.62□□□□□ -1.35
PSMA4-221ENST00000560842 RGL3Q3MIN7 710 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms