RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 LTBP3Q9NS15 1303 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CEP170BQ9Y4F5 1589 aaPredicted RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM75PA6NK02 468 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 XPOTO43592 962 aaKnown RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CAVIN2O95810 425 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 ABCB4P21439 1286 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CNTFP26441 200 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CDK8P49336 464 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 DDR1Q08345 913 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 RTN1Q16799 776 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 E4F1Q66K89 784 aaPredicted RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF449Q6P9G9 518 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CPLX2Q6PUV4 134 aaKnown RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 SIRT2Q8IXJ6 389 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 USP7Q93009 1102 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 FUBP3Q96I24 572 aaKnown RBP eCLIP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 COG3Q96JB2 828 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 JPH2Q9BR39 696 aaPredicted RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 NUCKS1Q9H1E3 243 aaKnown RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 SLC52A2Q9HAB3 445 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 FBXO10Q9UK96 956 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 PCDHB14Q9Y5E9 798 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 NALCNQ8IZF0 1738 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 LRRC7Q96NW7 1537 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 EYA2O00167 538 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 TBX1O43435 398 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 IL6STP40189 918 aaPredicted RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 KCNJ6P48051 423 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 RXRGP48443 463 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 EVCP57679 992 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 SCRN1Q12765 414 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CRYMQ14894 314 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 LRRFIP1Q32MZ4 808 aaKnown RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 CXorf57Q6NSI4 855 aaKnown RBP7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 POTEHQ6S545 545 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM42Q8IWZ5 723 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 FAM156AQ8NDB6 213 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 KIAA1191Q96A73 305 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 TTC41PQ6P2S7 1318 aa7.51□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF142P52746 1687 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ELL2O00472 640 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GIPC1O14908 333 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 H2AFYO75367 372 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 DXOO77932 396 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 SOD2P04179 222 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TYRP1P17643 537 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF165P49910 485 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TBC1D8BQ0IIM8 1120 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GRIK3Q13003 919 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 CWF19L2Q2TBE0 894 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 AP1ARQ63HQ0 302 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 KIAA1211LQ6NV74 962 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GPR153Q6NV75 609 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 RBM43Q6ZSC3 357 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 NME9Q86XW9 330 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 CTCFLQ8NI51 663 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 DDX11Q96FC9 970 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ACO2Q99798 780 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 UTP14AQ9BVJ6 771 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 DNAI1Q9UI46 699 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TCHHQ07283 1943 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 PIK3R4Q99570 1358 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 E2F8A0AVK6 867 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ANO9A1A5B4 782 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 RRN3P2A6NIE6 340 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TMCO5BA8MYB1 307 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 UBAP1LF5GYI3 381 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TOR1BO14657 336 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 STX6O43752 255 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 RAG1P15918 1043 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 CPEP16870 476 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 LPOP22079 712 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GSDMDP57764 484 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ETF1P62495 437 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GRB10Q13322 594 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 PDE1CQ14123 709 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 GBX1Q14549 363 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 LONRF2Q1L5Z9 754 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 IER5LQ5T953 404 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 HGSNATQ68CP4 663 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 PGM2L1Q6PCE3 622 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 SPOCD1Q6ZMY3 1216 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 POTEDQ86YR6 584 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF511Q8NB15 262 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 DDX1Q92499 740 aaKnown RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 MYD88Q99836 296 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TEX13AQ9BXU3 409 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TRIM6Q9C030 488 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 SUV39H2Q9H5I1 410 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 TTC21BQ7Z4L5 1316 aa7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 RGPD8O14715 1765 aaPredicted RBP7.5□□□□□ -1.21
TSPAN3-209ENST00000560715 CCDC151A5D8V7 595 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 SUSD5O60279 629 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 NF2P35240 595 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 AK2P54819 239 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 GNAI1P63096 354 aa7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ZNF513Q8N8E2 541 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 N4BP2L2Q92802 583 aaPredicted RBP7.49□□□□□ -1.21
TSPAN3-209ENST00000560715 ATP6V1E2Q96A05 226 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms