RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 EDIL3O43854 480 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 CSF2RAP15509 400 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 AKAP17AQ02040 695 aaKnown RBP15.11■□□□□ 0.01
SMAD3-213ENST00000560175 PPIGQ13427 754 aaKnown RBP eCLIP15.11■□□□□ 0.012e-7■■■□□ 15.8
SMAD3-213ENST00000560175 MFSD10Q14728 455 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 ANKRD1Q15327 319 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 KIAA0753Q2KHM9 967 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 CEP55Q53EZ4 464 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 TMEM240Q5SV17 173 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
SMAD3-213ENST00000560175 CYP2W1Q8TAV3 490 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 LRCH3Q96II8 777 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 SLC26A6Q9BXS9 759 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 WNT8AQ9H1J5 351 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 C6orf50Q9HD87 102 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 KCNH7Q9NS40 1196 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 TMEM260Q9NX78 707 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 HDAC6Q9UBN7 1215 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 TELO2Q9Y4R8 837 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 UMODL1Q5DID0 1318 aa15.11■□□□□ 0.01
SMAD3-213ENST00000560175 H3BRB1 525 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 DEXIO95424 95 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 LGALS2P05162 132 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 ZNF286BP0CG31 522 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 CYP2C9P11712 490 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 AK2P54819 239 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 SSRP1Q08945 709 aaKnown RBP15.1■□□□□ 0.01
SMAD3-213ENST00000560175 SCRN1Q12765 414 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 MTMR1Q13613 665 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.1■□□□□ 0.015e-9■□□□□ 11.2
SMAD3-213ENST00000560175 PPP1R12CQ9BZL4 782 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 TUT1Q9H6E5 874 aaKnown RBP15.1■□□□□ 0.01
SMAD3-213ENST00000560175 IL23AQ9NPF7 189 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 KAT6AQ92794 2004 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 NFASCO94856 1347 aa15.1■□□□□ 0.01
SMAD3-213ENST00000560175 SCN5AQ14524 2016 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 IGLV3-22A0A075B6J6 115 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 GSTTP1A0A1W2PQM5 241 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 M0R2N6 131 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 CIITAP33076 1130 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 ARHGAP4P98171 946 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 HIC1Q14526 733 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 NPY5RQ15761 445 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 PTGISQ16647 500 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 FAM47CQ5HY64 1035 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 JAKMIP3Q5VZ66 844 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 FAM109BQ6ICB4 259 aaPredicted RBP15.09■□□□□ 0.01
SMAD3-213ENST00000560175 TRIM22Q8IYM9 498 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 CCDC148Q8NFR7 591 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 TET1Q8NFU7 2136 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 BICD2Q8TD16 824 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 PPP1R13LQ8WUF5 828 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 PGBD1Q96JS3 809 aa15.09■□□□□ 0.01
SMAD3-213ENST00000560175 TANC1Q9C0D5 1861 aa15.08■□□□□ 0.01
SMAD3-213ENST00000560175 FAM86B1E9PN63 330 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 ATG7O95352 703 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 CTDNEP1O95476 244 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 FAM86B2P0C5J1 330 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 ARP10275 920 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 ADAM17P78536 824 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 SMAD3P84022 425 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 TRIM71Q2Q1W2 868 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 CPLX2Q6PUV4 134 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 C7orf31Q8N865 590 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 DAGLBQ8NCG7 672 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 CAGE1Q8TC20 777 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 SEPT1Q8WYJ6 367 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 HERVK_113Q902F9 699 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 DHX38Q92620 1227 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 KIF2CQ99661 725 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 SLKQ9H2G2 1235 aaPredicted RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 AGO4Q9HCK5 861 aaKnown RBP15.08■□□□□ 0
SMAD3-213ENST00000560175 VPS54Q9P1Q0 977 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 STK36Q9NRP7 1315 aa15.08■□□□□ 0
SMAD3-213ENST00000560175 NOP56O00567 594 aaKnown RBP15.07■□□□□ 0
SMAD3-213ENST00000560175 CPLX1O14810 134 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 DHX15O43143 795 aaKnown RBP15.07■□□□□ 0
SMAD3-213ENST00000560175 SORBS3O60504 671 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 PPFIA3O75145 1194 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 LGR5O75473 907 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 PFKMP08237 780 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 IQCF3P0C7M6 154 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 RFC2P35250 354 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 USP11P51784 963 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 CCL23P55773 120 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 STK3Q13188 491 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 PTK7Q13308 1070 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 BFSP2Q13515 415 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 GPNMBQ14956 572 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 ME3Q16798 604 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 GALNT17Q6IS24 598 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 PSRC1Q6PGN9 363 aaPredicted RBP15.07■□□□□ 0
SMAD3-213ENST00000560175 ZNF365Q70YC5 407 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 RPUSD2Q8IZ73 545 aaKnown RBP15.07■□□□□ 0
SMAD3-213ENST00000560175 AFAP1L1Q8TED9 768 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 ALG1Q9BT22 464 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 RNPEPQ9H4A4 650 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 PCDHA4Q9UN74 947 aa15.07■□□□□ 0
SMAD3-213ENST00000560175 WDR81Q562E7 1941 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms