RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 LRFN3Q9BTN0 628 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 KATNAL1Q9BW62 490 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 RNPEPQ9H4A4 650 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 DIAPH3Q9NSV4 1193 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 RALGAPA2Q2PPJ7 1873 aa12.89□□□□□ -0.35
HERC1-204ENST00000559715 LOXHD1Q8IVV2 1947 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 LINC00271P0C7V0 271 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 MYCLP12524 364 aaPredicted RBP12.88□□□□□ -0.35
HERC1-204ENST00000559715 ICAM3P32942 547 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 PLA2G5P39877 138 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 IKBKEQ14164 716 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 KCNV1Q6PIU1 500 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 INPP4AQ96PE3 977 aaPredicted RBP12.88□□□□□ -0.35
HERC1-204ENST00000559715 TGS1Q96RS0 853 aaKnown RBP12.88□□□□□ -0.35
HERC1-204ENST00000559715 CNNM2Q9H8M5 875 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 CTNNA3Q9UI47 895 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 MTUS1Q9ULD2 1270 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 USP34Q70CQ2 3546 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 TTC3P53804 2025 aa12.88□□□□□ -0.35
HERC1-204ENST00000559715 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.87□□□□□ -0.35
HERC1-204ENST00000559715 SPATA31C2B4DYI2 1134 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 H3BRB1 525 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 HIP1O00291 1037 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 TREHO43280 583 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 DHX16O60231 1041 aaKnown RBP12.87□□□□□ -0.35
HERC1-204ENST00000559715 LGALS2P05162 132 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 ANTXR2P58335 489 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 FAM117BQ6P1L5 589 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 IL27Q8NEV9 243 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.87□□□□□ -0.35
HERC1-204ENST00000559715 UBAC1Q9BSL1 405 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 ZBED2Q9BTP6 218 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
HERC1-204ENST00000559715 TUT1Q9H6E5 874 aaKnown RBP12.87□□□□□ -0.35
HERC1-204ENST00000559715 ZNF318Q5VUA4 2279 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 EFCAB14O75071 495 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 SMIM10L2AP0DMW4 78 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 SMIM10L2BP0DMW5 78 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 THPOP40225 353 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 TOP1MTQ969P6 601 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
HERC1-204ENST00000559715 GPR20Q99678 358 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 UBE2ZQ9H832 354 aaPredicted RBP12.86□□□□□ -0.35
HERC1-204ENST00000559715 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 EMSYQ7Z589 1322 aa12.86□□□□□ -0.35
HERC1-204ENST00000559715 PNMA6FA0A0J9YX94 578 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 PI4K2BG5E9Z4 385 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 GCOM1H8Y6P7 765 aaPredicted RBP12.85□□□□□ -0.35
HERC1-204ENST00000559715 MEIS2O14770 477 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 GPR37L1O60883 481 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 POLR2MP0CAP2 368 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 CCND2P30279 289 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 LEXMQ3ZCV2 418 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 FAM26DQ5JW98 314 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 FCHSD1Q86WN1 690 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 HOMER1Q86YM7 354 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 FAM178BQ8IXR5 827 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
HERC1-204ENST00000559715 SUPT16HQ9Y5B9 1047 aaKnown RBP12.85□□□□□ -0.35
HERC1-204ENST00000559715 KIAA1671Q9BY89 1806 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 E7EWF7 191 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 CHMLP26374 656 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 EPC2Q52LR7 807 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 TTC22Q5TAA0 569 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 METTL7BQ6UX53 244 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 CYFIP1Q7L576 1253 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 MB21D2Q8IYB1 491 aaPredicted RBP12.84□□□□□ -0.35
HERC1-204ENST00000559715 NEK9Q8TD19 979 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 MLXIPQ9HAP2 919 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 RC3H2Q9HBD1 1191 aaKnown RBP12.84□□□□□ -0.35
HERC1-204ENST00000559715 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
HERC1-204ENST00000559715 ARIH1Q9Y4X5 557 aaPredicted RBP12.84□□□□□ -0.35
HERC1-204ENST00000559715 H3BNC9 293 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 IFIT3O14879 490 aaKnown RBP12.83□□□□□ -0.36
HERC1-204ENST00000559715 ATP9AO75110 1047 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 CHRNA1P02708 482 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 MYOCDQ8IZQ8 938 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 CRIPAKQ8N1N5 446 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 LMBR1Q8WVP7 490 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 MRPL38Q96DV4 380 aaKnown RBP12.83□□□□□ -0.36
HERC1-204ENST00000559715 SENP7Q9BQF6 1050 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 USP26Q9BXU7 913 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 EHMT1Q9H9B1 1298 aa12.83□□□□□ -0.36
HERC1-204ENST00000559715 GRXCR2A6NFK2 248 aa12.82□□□□□ -0.36
HERC1-204ENST00000559715 PIK3CDO00329 1044 aa12.82□□□□□ -0.36
HERC1-204ENST00000559715 SGSM2O43147 1006 aa12.82□□□□□ -0.36
HERC1-204ENST00000559715 CAND2O75155 1236 aa12.82□□□□□ -0.36
HERC1-204ENST00000559715 STAM2O75886 525 aa12.82□□□□□ -0.36
HERC1-204ENST00000559715 AMHP03971 560 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms