RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 TMX2Q9Y320 296 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 PHRF1Q9P1Y6 1649 aaKnown RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 AK9Q5TCS8 1911 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 SMIM22K7EJ46 135 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 PTPREP23469 700 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 DDIT3P35638 169 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 PRPF4BQ13523 1007 aaKnown RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 TAF12Q16514 161 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 ARMCX5Q6P1M9 558 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 POTEDQ86YR6 584 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 MRIQ9BWK5 157 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
CARMIL3-202ENST00000559694 FAM205CA6NFA0 338 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 H0YCG3 227 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 MYL3P08590 195 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 SRGAP2CP0DJJ0 459 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 ZSCAN20P17040 1043 aaPredicted RBP11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 TUBB4BP68371 445 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 PPP2R5AQ15172 486 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 MFSD14CQ5VZR4 134 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 RGS22Q8NE09 1264 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 DISC1Q9NRI5 854 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 GAKO14976 1311 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 ASB14A6NK59 587 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 SFI1A8K8P3 1242 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 NR3C2P08235 984 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 DNAJC21Q5F1R6 531 aaKnown RBP11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 MB21D1Q8N884 522 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 POMGNT1Q8WZA1 660 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 CDCA5Q96FF9 252 aa11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 DDX41Q9UJV9 622 aaKnown RBP11.71□□□□□ -0.53
CARMIL3-202ENST00000559694 COBLO75128 1261 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 TFDP1Q14186 410 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 LONRF3Q496Y0 759 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 SMYD4Q8IYR2 804 aaPredicted RBP11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 BANK1Q8NDB2 785 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 KMT5AQ9NQR1 393 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 ARMCX3Q9UH62 379 aaPredicted RBP11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 CEP83Q9Y592 693 aa11.71□□□□□ -0.54
CARMIL3-202ENST00000559694 YDJCA8MPS7 323 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 TUBBP07437 444 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 DLATP10515 647 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 TXNP10599 105 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 USP11P51784 963 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 SWSAP1Q6NVH7 229 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 CTNNBL1Q8WYA6 563 aaPredicted RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 GSDMAQ96QA5 445 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 PARP4Q9UKK3 1724 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 KRT76Q01546 638 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 SREBF2Q12772 1141 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 NFX1Q12986 1120 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 ADAM9Q13443 819 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 HLTFQ14527 1009 aaKnown RBP eCLIP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 FBXO38Q6PIJ6 1188 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 NLRP4Q96MN2 994 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 SPTLC3Q9NUV7 552 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 GUCA1BQ9UMX6 200 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 VCAM1P19320 739 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 CKAP4Q07065 602 aaKnown RBP11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 CAPZA3Q96KX2 299 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 MAGEF1Q9HAY2 307 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 HPS5Q9UPZ3 1129 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 KDM3BQ7LBC6 1761 aa11.7□□□□□ -0.54
CARMIL3-202ENST00000559694 XRCC5P13010 732 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 RPS6P62753 249 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 OTUD6BQ8N6M0 293 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 MAD2L2Q9UI95 211 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 PALM3A6NDB9 673 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 PP2D1A8MPX8 630 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 HSF2BPO75031 334 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 SLC25A27O95847 323 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 CD19P15391 556 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 CTNNA2P26232 953 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 PRELPP51888 382 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 JAK3P52333 1124 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 SEC23AQ15436 765 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 GPR161Q8N6U8 529 aaKnown RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 GIMAP8Q8ND71 665 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 ATRIPQ8WXE1 791 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 PPM1EQ8WY54 764 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 SPATA33Q96N06 139 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 GABBR1Q9UBS5 961 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 GLTPD2A6NH11 291 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 MAATS1Q7Z4T9 603 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 TRIML1Q8N9V2 468 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 ALS2CR12Q96Q35 445 aa11.69□□□□□ -0.54
CARMIL3-202ENST00000559694 MAP3K14Q99558 947 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms