RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	MSC	O60682	206 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	MMP3	P08254	477 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	RTP1	P59025	263 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	TLE2	Q04725	743 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	DIS3L2	Q8IYB7	885 aa	Known RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	TRIM44	Q96DX7	344 aa	Predicted RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	PNMA2	Q9UL42	364 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	C5orf42	Q9H799	3197 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	FRMPD4	Q14CM0	1322 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	IGLV3-22	A0A075B6J6	115 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	RBM47	A0AV96	593 aa	Known RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	SPATA31C2	B4DYI2	1134 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	CDKL5	O76039	1030 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	CYP2C9	P11712	490 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	KCNA2	P16389	499 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	SREBF1	P36956	1147 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	PURA	Q00577	322 aa	Known RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	CELF3	Q5SZQ8	465 aa	Known RBP	11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	FAM173B	Q6P4H8	233 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	FERMT3	Q86UX7	667 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	KAT2B	Q92831	832 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	CHAMP1	Q96JM3	812 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	MXRA8	Q9BRK3	442 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	UBIAD1	Q9Y5Z9	338 aa		11.51	□□□□□ -0.57
FAM227B-208	ENST00000559573	TMEM150B	A6NC51	233 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	GNA11	P29992	359 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	NBPF20	Q3BBV1	942 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	CEP55	Q53EZ4	464 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	MCTP1	Q6DN14	999 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	PLA2G4D	Q86XP0	818 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	FAM184A	Q8NB25	1140 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	CRYGN	Q8WXF5	182 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	LENG9	Q96B70	501 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	C8orf76	Q96K31	380 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	PPP1R12C	Q9BZL4	782 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	TRIM43B	A6NCK2	446 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCNE2	O96020	404 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	GH1	P01241	217 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCDC148	Q8NFR7	591 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	TRIM43	Q96BQ3	446 aa	Predicted RBP	11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	RNPEP	Q9H4A4	650 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	SPC25	Q9HBM1	224 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573	JADE2	Q9NQC1	790 aa		11.5	□□□□□ -0.57
FAM227B-208	ENST00000559573		A0A0U1RQG5	324 aa	Predicted RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	B4GALT4	O60513	344 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCNT1	O60563	726 aa	Known RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	MMP1	P03956	469 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	ITGA7	Q13683	1181 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	PPP1R18	Q6NYC8	613 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	TRAPPC12	Q8WVT3	735 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	WNT8B	Q93098	351 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	GLT1D1	Q96MS3	346 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	MPHOSPH6	Q99547	160 aa	Known RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	OSBPL7	Q9BZF2	842 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	UPF3A	Q9H1J1	476 aa	Known RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	AGO4	Q9HCK5	861 aa	Known RBP	11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	CHMP5	Q9NZZ3	219 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	PHF24	Q9UPV7	400 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	STK36	Q9NRP7	1315 aa		11.49	□□□□□ -0.57
FAM227B-208	ENST00000559573	ESYT2	A0FGR8	921 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573		A6NJR5	290 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	NOP56	O00567	594 aa	Known RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	MSH4	O15457	936 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	FIBP	O43427	364 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	OFD1	O75665	1012 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	TCF7	P36402	384 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	FAAP100	Q0VG06	881 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	TRAF1	Q13077	416 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	PKP1	Q13835	747 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	KIAA0753	Q2KHM9	967 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	TNFRSF25	Q93038	417 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	GPR20	Q99678	358 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	GZF1	Q9H116	711 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	MAP3K20	Q9NYL2	800 aa	Known RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	NRBP1	Q9UHY1	535 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCDC194	A0A1B0GVG4	234 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	GSTTP1	A0A1W2PQM5	241 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	DDX11L8	A8MPP1	907 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	MEIS1	O00470	390 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	KRT2	P35908	639 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	CCL23	P55773	120 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	IGBP1	P78318	339 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	GNPTAB	Q3T906	1256 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	ZNF577	Q9BSK1	485 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	C16orf70	Q9BSU1	422 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	HDAC6	Q9UBN7	1215 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	TET1	Q8NFU7	2136 aa		11.48	□□□□□ -0.57
FAM227B-208	ENST00000559573	IPO5	O00410	1097 aa	Known RBP	11.47	□□□□□ -0.57
FAM227B-208	ENST00000559573	DHX15	O43143	795 aa	Known RBP	11.47	□□□□□ -0.57
FAM227B-208	ENST00000559573	MCM7	P33993	719 aa		11.47	□□□□□ -0.57
FAM227B-208	ENST00000559573	AP3B2	Q13367	1082 aa		11.47	□□□□□ -0.57
FAM227B-208	ENST00000559573	NONO	Q15233	471 aa	Known RBP eCLIP	11.47	□□□□□ -0.57

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