RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 KAT6BQ8WYB5 2073 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 GMNCA6NCL1 334 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 CHUKO15111 745 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 CLIC2O15247 247 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 MEFVO15553 781 aaPredicted RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 MMEP08473 750 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 GLE1Q53GS7 698 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 FYB2Q5VWT5 728 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 GJA10Q969M2 543 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 RNPC3Q96LT9 517 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 NT5C3AQ9H0P0 336 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 CXorf56Q9H5V9 222 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 KLHL14Q9P2G3 628 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 A0A1W2PQC6 194 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 MEIS1O00470 390 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 EXOC3O60645 756 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 MYL1P05976 194 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 SNX1Q13596 522 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 UBE2SQ16763 222 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 MUM1Q2TAK8 710 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 GALNT17Q6IS24 598 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 USP17L2Q6R6M4 530 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 NYXQ9GZU5 481 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DDX47Q9H0S4 455 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 XAB2Q9HCS7 855 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 SUFUQ9UMX1 484 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 KDM3AQ9Y4C1 1321 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DIP2AQ14689 1571 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 POTEMA6NI47 508 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 KRT15P19012 456 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DDB1Q16531 1140 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 TPH2Q8IWU9 490 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 SRBD1Q8N5C6 995 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 SREK1Q8WXA9 508 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 THOC1Q96FV9 657 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 PBKQ96KB5 322 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 TSNARE1Q96NA8 513 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 NCAPGQ9BPX3 1015 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 AZI2Q9H6S1 392 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 SH2D4AQ9H788 454 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 RNF14Q9UBS8 474 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 PARP2Q9UGN5 583 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 GGT7Q9UJ14 662 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DAAM1Q9Y4D1 1078 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 CCDC169A6NNP5 214 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 UFL1O94874 794 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 ZNF18P17022 549 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DR1Q01658 176 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 MECOMQ03112 1051 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 HHATQ5VTY9 493 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 ADSSL1Q8N142 457 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 RAB3IPQ96QF0 476 aaPredicted RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 HOMER3Q9NSC5 361 aa7.75□□□□□ -1.17
USP3-210ENST00000559192 DNAJC17Q9NVM6 304 aaKnown RBP7.75□□□□□ -1.17
USP3-210ENST00000559192 LUC7L3O95232 432 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 FGGP02679 453 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 AFPP02771 609 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 MDH1P40925 334 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 CYP4A11Q02928 519 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 CUL1Q13616 776 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 FMO2Q99518 471 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 NAP1L4Q99733 375 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 ZMYND12Q9H0C1 365 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 VPS37BQ9H9H4 285 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 KANSL2Q9H9L4 492 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 TBK1Q9UHD2 729 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 ATP2A1O14983 1001 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 THAP12O43422 761 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 SRGNP10124 158 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 PLCG2P16885 1265 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 CARSP49589 748 aaKnown RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 PPP2R2AP63151 447 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 MESDQ14696 234 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 DPP8Q6V1X1 898 aaPredicted RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 LCA5Q86VQ0 697 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 MCUR1Q96AQ8 359 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 CCT8L2Q96SF2 557 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 NUF2Q9BZD4 464 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 TMEM260Q9NX78 707 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 FBXL5Q9UKA1 691 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 PXDNQ92626 1479 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 DLG5Q8TDM6 1919 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 LRRN2O75325 713 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 LSP1P33241 339 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 ADCY8P40145 1251 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 PABPC4Q13310 644 aaKnown RBP eCLIP7.74□□□□□ -1.179e-6■■■■□ 24.7
USP3-210ENST00000559192 TRIP13Q15645 432 aaPredicted RBP7.74□□□□□ -1.17
USP3-210ENST00000559192 SUSD4Q5VX71 490 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 WDR93Q6P2C0 686 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 TPTE2Q6XPS3 522 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 ARL8AQ96BM9 186 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 PSTPIP2Q9H939 334 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 MLXIPLQ9NP71 852 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 IRAK4Q9NWZ3 460 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 GCNT4Q9P109 453 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 CEP72Q9P209 647 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP3-210ENST00000559192 HIP1RO75146 1068 aa7.74□□□□□ -1.17
USP3-210ENST00000559192 PPP1R37O75864 691 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms