RNA–Protein interactions for RNA: ENST00000558995.5

CPNE6-210, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-210ENST00000558995 NUDT12Q9BQG2 462 aa14.84□□□□□ -0.03
CPNE6-210ENST00000558995 ACBD3Q9H3P7 528 aa14.84□□□□□ -0.03
CPNE6-210ENST00000558995 ZNF263O14978 683 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 NEK11Q8NG66 645 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 MED4Q9NPJ6 270 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 FAM207AQ9NSI2 230 aaPredicted RBP14.83□□□□□ -0.04
CPNE6-210ENST00000558995 FAM198AQ9UFP1 575 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 SWAP70Q9UH65 585 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 MACROD2A1Z1Q3 448 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 YDJCA8MPS7 323 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 HLA-DOAP06340 250 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 CLK2P49760 499 aaKnown RBP14.83□□□□□ -0.04
CPNE6-210ENST00000558995 SEPT2Q15019 361 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 LRRC55Q6ZSA7 311 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 C10orf67Q8IYJ2 551 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 ADGRF4Q8IZF3 695 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 TRIM58Q8NG06 486 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 CAPZA3Q96KX2 299 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 TSG101Q99816 390 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 MMRN2Q9H8L6 949 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 ARHGAP20Q9P2F6 1191 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 PCDHA13Q9Y5I0 950 aa14.83□□□□□ -0.04
CPNE6-210ENST00000558995 TRIM66O15016 1216 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 EPHB6O15197 1021 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 LCA5LO95447 670 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 MRPL12P52815 198 aaKnown RBP14.82□□□□□ -0.04
CPNE6-210ENST00000558995 CCDC96Q2M329 555 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 MAP9Q49MG5 647 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 KCNK18Q7Z418 384 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 IFIH1Q9BYX4 1025 aaKnown RBP14.82□□□□□ -0.04
CPNE6-210ENST00000558995 VIPAS39Q9H9C1 493 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 DDX25Q9UHL0 483 aaKnown RBP14.82□□□□□ -0.04
CPNE6-210ENST00000558995 JRKLQ9Y4A0 524 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 MYO3BQ8WXR4 1341 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 PLEKP08567 350 aaPredicted RBP14.82□□□□□ -0.04
CPNE6-210ENST00000558995 IQCEQ6IPM2 695 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 KRT26Q7Z3Y9 468 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 CAGE1Q8TC20 777 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 CUL5Q93034 780 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 EDEM3Q9BZQ6 932 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 JADE2Q9NQC1 790 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 VPS18Q9P253 973 aa14.82□□□□□ -0.04
CPNE6-210ENST00000558995 PPP1R11O60927 126 aaPredicted RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 TACC1O75410 805 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 GCFC2P16383 781 aaKnown RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 KIF11P52732 1056 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 UBE2SQ16763 222 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 HSP90B2PQ58FF3 399 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 GPATCH4Q5T3I0 446 aaKnown RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 HAS1Q92839 578 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 RGPD3A6NKT7 1758 aaPredicted RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 RGPD4Q7Z3J3 1758 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 LRRIQ3A6PVS8 624 aaPredicted RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 N4BP1O75113 896 aaKnown RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 EIF4A3P38919 411 aaKnown RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 TTBK2Q6IQ55 1244 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 ARHGAP27Q6ZUM4 889 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 MYOCDQ8IZQ8 938 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 FAM71BQ8TC56 605 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 DEF6Q9H4E7 631 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 SH2D4AQ9H788 454 aa14.81□□□□□ -0.04
CPNE6-210ENST00000558995 TDRD3Q9H7E2 651 aaKnown RBP14.81□□□□□ -0.04
CPNE6-210ENST00000558995 ZNF185O15231 689 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 MARCH6O60337 910 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 PRLRP16471 622 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 SSR1P43307 286 aaKnown RBP14.8□□□□□ -0.04
CPNE6-210ENST00000558995 ECM1Q16610 540 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 RRAGAQ7L523 313 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 OTUD6BQ8N6M0 293 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 BAP1Q92560 729 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 DNAJC19Q96DA6 116 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 NAP1L4Q99733 375 aaKnown RBP14.8□□□□□ -0.04
CPNE6-210ENST00000558995 BMP2KQ9NSY1 1161 aaPredicted RBP14.8□□□□□ -0.04
CPNE6-210ENST00000558995 SNX12Q9UMY4 172 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 C10orf71Q711Q0 1435 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 PDE2AO00408 941 aaPredicted RBP14.8□□□□□ -0.04
CPNE6-210ENST00000558995 ZBTB5O15062 677 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 RAD21O60216 631 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 AKR1B10O60218 316 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 SLC16A2P36021 539 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 FKBP3Q00688 224 aaKnown RBP14.8□□□□□ -0.04
CPNE6-210ENST00000558995 LRRC41Q15345 812 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 HYIQ5T013 277 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 PSTPIP2Q9H939 334 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 PCDHA12Q9UN75 941 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 SRCAPQ6ZRS2 3230 aa14.8□□□□□ -0.04
CPNE6-210ENST00000558995 LRRC53A6NM62 1247 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 LMAN1P49257 510 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 COASYQ13057 564 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 ZCWPW2Q504Y3 356 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 MUM1L1Q5H9M0 696 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 KCTD1Q719H9 257 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 GLIS3Q8NEA6 775 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 CCDC102AQ96A19 550 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 MTMR8Q96EF0 704 aa14.79□□□□□ -0.04
CPNE6-210ENST00000558995 PRMT6Q96LA8 375 aaPredicted RBP14.79□□□□□ -0.04
CPNE6-210ENST00000558995 FAN1Q9Y2M0 1017 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms