RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 CRYGNQ8WXF5 182 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 HERVK_113Q902F9 699 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 GPR20Q99678 358 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 BCAS3Q9H6U6 928 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 MLXIPQ9HAP2 919 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
BMP4-204ENST00000558961 CYP46A1Q9Y6A2 500 aa12.87□□□□□ -0.35
BMP4-204ENST00000558961 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 TMEM265A0A087WTH1 108 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 SMCO2A6NFE2 343 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 LGALS2P05162 132 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 RFC2P35250 354 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 CCL23P55773 120 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 MTMR1Q13613 665 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 PTGISQ16647 500 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 ZNF365Q70YC5 407 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 CYFIP1Q7L576 1253 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 DEFB123Q8N688 67 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 PPP1R13LQ8WUF5 828 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 DHX38Q92620 1227 aaKnown RBP12.86□□□□□ -0.35
BMP4-204ENST00000558961 ZNF274Q96GC6 653 aaPredicted RBP12.86□□□□□ -0.35
BMP4-204ENST00000558961 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 UPF3BQ9BZI7 483 aaKnown RBP12.86□□□□□ -0.35
BMP4-204ENST00000558961 JADE2Q9NQC1 790 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 MTMR10Q9NXD2 777 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 HDAC6Q9UBN7 1215 aa12.86□□□□□ -0.35
BMP4-204ENST00000558961 NAP1L2Q9ULW6 460 aaPredicted RBP12.86□□□□□ -0.35
BMP4-204ENST00000558961 TET1Q8NFU7 2136 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 H3BRB1 525 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
BMP4-204ENST00000558961 ATP9AO75110 1047 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 IQCF3P0C7M6 154 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 BFSP2Q13515 415 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 Q7L0L9 218 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 CCDC155Q8N6L0 562 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 C7orf31Q8N865 590 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 AFAP1L1Q8TED9 768 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 CCDC12Q8WUD4 166 aaPredicted RBP12.85□□□□□ -0.35
BMP4-204ENST00000558961 PHKBQ93100 1093 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 SCLYQ96I15 445 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
BMP4-204ENST00000558961 SIP14410 1827 aa12.85□□□□□ -0.35
BMP4-204ENST00000558961 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.84□□□□□ -0.35
BMP4-204ENST00000558961 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.84□□□□□ -0.35
BMP4-204ENST00000558961 SORBS3O60504 671 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 ACRP10323 421 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 PTK7Q13308 1070 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 HIC1Q14526 733 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
BMP4-204ENST00000558961 NIPA1Q7RTP0 329 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 RPUSD2Q8IZ73 545 aaKnown RBP12.84□□□□□ -0.35
BMP4-204ENST00000558961 CCDC148Q8NFR7 591 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 MXRA8Q9BRK3 442 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 ALG1Q9BT22 464 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 NCOA5Q9HCD5 579 aaKnown RBP12.84□□□□□ -0.35
BMP4-204ENST00000558961 SH3GLB2Q9NR46 395 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 KCNH7Q9NS40 1196 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 TELO2Q9Y4R8 837 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 NFASCO94856 1347 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 EMSYQ7Z589 1322 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 WDR81Q562E7 1941 aa12.84□□□□□ -0.35
BMP4-204ENST00000558961 KAT6AQ92794 2004 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 PARNO95453 639 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 FGBP02675 491 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 CYP3A4P08684 503 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 GNA11P29992 359 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 ANP32AP39687 249 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 CCT2P78371 535 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 ADAM17P78536 824 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 CEP55Q53EZ4 464 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 ZNF697Q5TEC3 545 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 SERINC5Q86VE9 423 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 TRIM50Q86XT4 487 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 FAM177A1Q8N128 213 aaPredicted RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 REXO1Q8N1G1 1221 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 PGBD1Q96JS3 809 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 IPO9Q96P70 1041 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 MTIF3Q9H2K0 278 aaKnown RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 C6orf50Q9HD87 102 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 PDRG1Q9NUG6 133 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 TMEM260Q9NX78 707 aa12.83□□□□□ -0.36
BMP4-204ENST00000558961 CXXC1Q9P0U4 656 aaPredicted RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 ZNF215Q9UL58 517 aaPredicted RBP12.83□□□□□ -0.36
BMP4-204ENST00000558961 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 MEIS1O00470 390 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 ADAMTS3O15072 1205 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 CXCL10P02778 98 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 SMIM10L2AP0DMW4 78 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 SMIM10L2BP0DMW5 78 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 CKBP12277 381 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 SELPP16109 830 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 DNAJB2P25686 324 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 TCF7P36402 384 aaPredicted RBP12.82□□□□□ -0.36
BMP4-204ENST00000558961 CHMP4BP1P59074 171 aa12.82□□□□□ -0.36
BMP4-204ENST00000558961 AKAP17AQ02040 695 aaKnown RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms