RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CCL14Q16627 93 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 B3GNT9Q6UX72 402 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 SENP7Q9BQF6 1050 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 TEKT3Q9BXF9 490 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 HPSEQ9Y251 543 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 PP2D1A8MPX8 630 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 GNRH1P01148 92 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 PFKFB1P16118 471 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 LIG1P18858 919 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 HOXD10P28358 340 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 CDC25AP30304 524 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 KCNV1Q6PIU1 500 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 FAM13BQ9NYF5 915 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 TSKSQ9UJT2 592 aa20.37■□□□□ 0.85
CLPX-203ENST00000558958 KIAA1217Q5T5P2 1943 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 NFASCO94856 1347 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 RBM47A0AV96 593 aaKnown RBP20.36■□□□□ 0.85
CLPX-203ENST00000558958 NDUFA8P51970 172 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 SP2Q02086 613 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 FAM160A1Q05DH4 1040 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 SKOR2Q2VWA4 1001 aaPredicted RBP20.36■□□□□ 0.85
CLPX-203ENST00000558958 TAPT1Q6NXT6 567 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 CCDC73Q6ZRK6 1079 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 ENGASEQ8NFI3 743 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 CCSER1Q9C0I3 900 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 UNC45AQ9H3U1 944 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 ABHD16BQ9H3Z7 469 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 SRRDQ9UH36 339 aa20.36■□□□□ 0.85
CLPX-203ENST00000558958 UBA7P41226 1012 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 IRF5Q13568 498 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 ARHGEF6Q15052 776 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 NCAPH2Q6IBW4 605 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 CCDC62Q6P9F0 684 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 SCFD2Q8WU76 684 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 SDF4Q9BRK5 362 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 MMTAG2Q9BU76 263 aaKnown RBP20.35■□□□□ 0.85
CLPX-203ENST00000558958 PDGFCQ9NRA1 345 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 DDX41Q9UJV9 622 aaKnown RBP20.35■□□□□ 0.85
CLPX-203ENST00000558958 KCNH3Q9ULD8 1083 aa20.35■□□□□ 0.85
CLPX-203ENST00000558958 DDX39AO00148 427 aaKnown RBP20.34■□□□□ 0.85
CLPX-203ENST00000558958 EML1O00423 815 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 TRAK2O60296 914 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 NR1I2O75469 434 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 ARIH2O95376 493 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 UBA1P22314 1058 aaKnown RBP20.34■□□□□ 0.85
CLPX-203ENST00000558958 SNW1Q13573 536 aaKnown RBP20.34■□□□□ 0.85
CLPX-203ENST00000558958 ACVR2BQ13705 512 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 KLHL40Q2TBA0 621 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 CABP7Q86V35 215 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 FMR1NBQ8N0W7 255 aaPredicted RBP20.34■□□□□ 0.85
CLPX-203ENST00000558958 GIMAP8Q8ND71 665 aaPredicted RBP20.34■□□□□ 0.85
CLPX-203ENST00000558958 BCAS3Q9H6U6 928 aa20.34■□□□□ 0.85
CLPX-203ENST00000558958 CYP2C19P33261 490 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 TXLNAP40222 546 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 SYKP43405 635 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 KRT76Q01546 638 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 NEDD9Q14511 834 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 TTLL4Q14679 1199 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 LY6KQ17RY6 165 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 KRT79Q5XKE5 535 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 TRMT44Q8IYL2 757 aaKnown RBP20.33■□□□□ 0.85
CLPX-203ENST00000558958 STK24Q9Y6E0 443 aa20.33■□□□□ 0.85
CLPX-203ENST00000558958 A0A087X0B3 334 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 CHMP2AO43633 222 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 CCNE2O96020 404 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 TXNP10599 105 aaKnown RBP20.32■□□□□ 0.84
CLPX-203ENST00000558958 ZNF746Q6NUN9 644 aaPredicted RBP20.32■□□□□ 0.84
CLPX-203ENST00000558958 CYFIP1Q7L576 1253 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 ERMNQ8TAM6 284 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 TRIB2Q92519 343 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 PANK2Q9BZ23 570 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 JPH1Q9HDC5 661 aaPredicted RBP20.32■□□□□ 0.84
CLPX-203ENST00000558958 DACT1Q9NYF0 836 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 SLC9A2Q9UBY0 812 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 CASP8AP2Q9UKL3 1982 aa20.32■□□□□ 0.84
CLPX-203ENST00000558958 SLC26A4O43511 780 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 ZNF202O95125 648 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 KARSQ15046 597 aaKnown RBP20.31■□□□□ 0.84
CLPX-203ENST00000558958 EPHA7Q15375 998 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 PRAMEF19Q5SWL8 479 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 MIER3Q7Z3K6 550 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 PDILTQ8N807 584 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 SNX29Q8TEQ0 813 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 TCEAL9Q9UHQ7 104 aa20.31■□□□□ 0.84
CLPX-203ENST00000558958 ZHX1Q9UKY1 873 aaPredicted RBP20.31■□□□□ 0.84
CLPX-203ENST00000558958 POLR2DO15514 142 aaKnown RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 FARP2O94887 1054 aaPredicted RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 GGPS1O95749 300 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 ZNF865P0CJ78 1059 aaPredicted RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 SFNP31947 248 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 ADCYAP1R1P41586 468 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 CELF3Q5SZQ8 465 aaKnown RBP20.3■□□□□ 0.84
CLPX-203ENST00000558958 TMEM63BQ5T3F8 832 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 MFSD14CQ5VZR4 134 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 HAUS3Q68CZ6 603 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 IQSEC1Q6DN90 963 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 METTL7BQ6UX53 244 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 RDM1Q8NG50 284 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 HSD17B14Q9BPX1 270 aa20.3■□□□□ 0.84
CLPX-203ENST00000558958 EIF2AK1Q9BQI3 630 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 239.5 ms